Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04299 ATGGGACTGAGAGATCGTAGTAGCAGCATGGAGGATCCAGATGGGACATTAGCTAGTGTTGCCCAATGCATTGAGCAGCTGCGCCAGAGCTCGTCTTCTGTGCACGAGAAAGAGTATTCCTTAAGGCAGTTATTGGATCTTATAGATACACGTGAAAATGCATTTAGTGCTGTTGGATCTCACTCTCAGGCAGTTCCAGTACTTGTTTCCCTTCTTCGGTCAGGTTCGTTGAATGTGAAGATCCAGGCAGCAACTGTTTTGGGCTCACTTTGTAAAGAAAATGAACTGAGGGTGAAAGTCTTGCTTGGTGGATGTATTCCTCCATTACTTGGTCTGCTGAAGTCAAATTCTACTGAAGGCCAAATTGCTGCTGCAAAGACTATATATGCTGTTTCTCAAGGTGGCGCGAGAGACCATGTTGGCTCAAAAATATTTTCGACCGAAGGAGTAGTACCAGTGCTTTGGCAGCAGTTGCGAACTGGCCTGAAAACCGGAAACGTAGTTGAAAGTTTATTGACGGGAACATTGAAAAATCTCTCCAGCAATGCAGAGGGATTCTGGAATGCAACAATTCAAGCCGGAGGAGTGGACATATTAGTGAAGTTATTGGCAACAGGGCAGCCTAGCACTTTAGCCAATGTTTGCTTTTTGCTTGCTTCTGTAATGATGGAGGATGCATCTGTTTGTTCGAAAGTGTTGAACGCAGAGGTGACTAAACAACTCTTGAAACTATTAGGCCCCGGTAATGATGACCTTGTTAGAGCTGAAGCAGCTGGTGCTCTTAAATCTCTATCTGCTCAGTGCAAAGAGGCGAAACGGGAGATAGCCAGTTCTAATGGCATTCCTGCTTTGATCAATGCTACCATAGCTCCTTCTAAAGAATACATGCAGGGTGAGTGTGCTCAAGCTTTGCAAGAGAATGCTATGTGTGCTTTAGCAAACATCTCTGGTGGTTTGTCTTATGTCATATCTAGCCTTGGTCAAAGCCTTGAATCATGCTCTTCCCCTACCCAAACTGCTGACACTTTAGGGGCTATAGCATCTGCTCTTATGATATATGATAACAAGGCAGAATCTACCAAACCATCAGATCCTTTGGTGGTTGAACAGACATTACTCAAACAATTCAAACCTCGCTTACCCTTCCTTGTGCAAGAACGGACCATTGAAGCTTTAGCTAGTTTGTACGGCAATCCCATACTCTCAACTAAACTGGAAAATTCCCATGGAAAACATTTGCTTGTTGGTCTGATAACGATGGCTGCTGACGAAGTGCAAGATGAGCTTATAAAAGCTCTTTTGGCACTATGCAAAAATGAAGGAAGCCTATGGCGTGCACTTCAGGGTCGTGAAGGAGTTCAGCTGTTGATATCTCTTCTTGGTCTTTCATCAGAACAGCAGCAAGAATGTGCAGTTGCATTGCTTTGCCTTTTATCTAATGAAAATGATGAAAGTAAATGGGCAATTACAGCTGCTGGTGGTATACCCCCACTTGTTCAAATTTTGGAGACAGGATCTGCAAAAGCAAAGGAAGATTCGGCAAGAATCCTTAAGAATTTGTGCAATCATAGTGAAGATATACGTGCTTGTGTTGAAAGTGCAGATGCTGTTCCTGCATTGTTATGGCTATTGAAGAATGGAAGTCCTAACGGGAAGGATATCGCAGCAAAGACCATAAATCATTTAATTCATAAATCTGATACTACCACTATCAGTCAGCTTACAGCCTTATTGACAAGTGACCTTCCTGATTCTAAGATATATGTTTTGGATGCTTTGAGAAGTATGCTTTGTGTTGCTCCTCTTAGCGACATTTTACGTGAAGGTAGTGCCGCTGGTGATGCATTTGACACCATGATAATGTTATTGAGCGCAACAAAGGAAGAAACTCAGGCAAAATCTGCATCAGCTCTGGCCGAAATTTTTGAAGCTAGGAAAGATTTGCGTGAAAGTAGCATTGCTGTCAAAGCTCTTTGTTCATCCATGAAGTTGCTTGATTTTGAATCTGAAAATATCCTAATGGAGTCCTCAAACTGCCTGGCTGCAATATTTCTTTCCATCAATGAGAACAAGGATGTAGCAGCTGTTGCTAAAGATACATTAACCCCCCTAGTTGCACTAGCTAACTCTTCAGTTTTGGAAGTAGCAGAGAGGGCTATAGGTGCTGTAGCAAATCTTATTTTGGATATTGGAATTGCAAAGAAAGTTGTTGCAGAAGAAGTTATCTTGCCTGCTACCAGAGTATTACATGAAGGCACAATTTCTGGAAAAACTCATGCTGCAGCAGCAATCGCTCGCCTCTTACATTCTCAGAAAGTTAATAATGCTGTTACCGATTGTGTGAATCGTGCCGGCACTGTTCTTGCATTAGTTTCTTTTTTGGATTCTTCTGCCAGCGGATCTGTTGACACATCAGAGGCACTGGAAGCACTTGCCATTCTGTCTAGGCCAGAAGAGACCGGTGCAAATATTAAACCAGCATGTGCAGTTTTGGCTGAATTCCCCAAAAGCATAAGACCAATAGTCCTGTGCATTGCCAATTCAACACCGACATTGCAAGATAAAACAATCGAGATTTTATCTCGATTATGTAAAGACCAGCCTGTCATTATAGGAGACACTATTGCTTCGGCCTCTGGATGTATATCTTCAATAGCAAAGAGGATAATTAGTTCCACAAATGTAAAGGTCAAAATTGGTGGAATTGCGCTTCTTATTTGTGCTGCAAAAGAAAATCCTCAGAGATTGGTGGAGGATCTCAATATATCAAACTTGTCTGCTAACCTTACTCAGTCTCTAGTTGATATTCTTATTTCTGCACAGCCTTCTTTGGGTAATCACGGTGATGATGATAATGACAAGGAATCCATCAGCATATGCAGGCATACAAAAGAAGAGGCCAACAGCCATGAGTCGAAAACTGGAACTTCTATTATACGTGGTGTTGATTTAGCTATATGGTTACTGTCTATTCTTGCTTGTCATGATGAAAAAAATAAAATAGCAATAATGAAGGCTGGAGCAATTGATGTTCTCGCCGACCGGATCTCTAATTGTTACTCACAATATTCTCAGATTGACTACAAAGAAGATAACAGCATGTGGATTTGTGCCTTGTTGTTGGCAATATTATTTCAAGATAGAGATATCATACGGGCACATTCAACCATAAAGTCTGTACCAGCACTAGCCAATTTATTGAAGTCAGAGGAATCAGCAAACAAATATTTTGCTGCACAATCAATAGCCAGTCTTGTTTGCAATGGTAGCAGGGGAACACTTCTGTCTGTGACAAATTCTGGGGCAGCAGGTGGACTTATCTCTTTGCTTGGTTGTGCTGATACTGATATCCACGAACTTCTGGAATTATCAGAGGAATTTTCTTTGGTGCGTTATCCTGATCAAGTGGCTCTAGAGAAGTTGTTTAGAGTTGATGATATAAGAGTTGGTGCCACTTCTCGGAAGGCAATACCTGCCCTAGTCGATCTTCTCAAACCAATTCCTGATCGCCCAGGTGCACCATTTTTAGCTCTTGGGCTTTTGACTCAGCTTGGTAGAGATTGTCCACCAAATAAGACTGTAATGGTAGAATCTGGGGCTTTAGAAGCTCTTACAAAGTATCTTTCCCTTGGTCCACAAGATGCAACCGAAGAAGCTGCTACAGATCTGCTAGGAATTCTGTTTAGTAGTGCTGATATACGAAAACACGACTCTGCATTTGGTGCTGTTAATCAACTTGTAGCTGTCCTACGCTTAGGAGGAAGAGGTGCAAGGTACAGTGCTGCAAAAGCATTGGAAAGTTTATTTTCGGCGGACCACATTAGAAACGCTGACATTGCTCGACAAGCTGTTCAACCCTTGGTAGAAATTCTTAACACTGGTTCAGAAAGGGAGCAGCATGCTTCAATTGCTGCATTGGTTGGGTTACTGAGTGAAAACCCATCAAGAGCACTTGCTGTTGCAGATGTTGAGATGAATGCAGTGGATGTTCTTTATAGGATCCTTTCGTCAAATTGTTCAATGGACCTCAAAGGGGACGCTGCTGAATTATGTTGCGCTCTTTTTGGAAATACAAGGATTCGGTCCACGGCTGCTGCTGCACGATGCGTTGAACCCCTAGTCTCTCTCCTTGCAACCGAGTTCAGTCCTGCTCATCATTCAGTTGTTCGGGCATTGGATAGACTTGTTGACGATGAGCAACTGGCTGAAATGGTTGCTGCACATGGGGCAGTCGTTCCTCTTGTTAGTCTACTGTCTGGTAGAAACTATGTACTTCACGAGGCCATTTCTAGAGCTCTGGTCAAGTTAGGAAAAGACAGACCTGCTTGTAAAATGGAAATGGTAAAAGCTGGAGTCATTGAAAGTATACTCGACATCTTACATGAAGCACCTGATTATTTGCTCGCAGCTTTTGCGGAACTGCTGCGTATATTAACCAATAATGCTACCATAGCTAAAGGACCATGGGCTGCTAAAGTTGTTGAACCCTTGTTTTTGTTATTGGCAAGACACGATTTTGTCCCCGACGGACAGCACAGTGCAATGCAGGTTTTGGTTAATATCCTAGAACATCCACAGTGTCGTGCTGACTATTCATTGACTTCTCGCAAAGTTATTGAACCACTTATCCCTTTGCTTGATTCACCGATATCGATTGTGCAACAGCTGGCTGCTGAGCTTCTTTCGCATCTGCTCCTAGAAGAACACCTTCAGAAGGATCCAGTGACACCGAAAGTAATTGCCCCGCTTATAAGAATTCTCGGTTCTGGTATACCTTTACTGCAGCAGAGAGCTGTAAAGGCCCTAGTTAGTATTGCACTAACATGGCCGAACGAAATTGCCAAAGAGGGTGGTGTTGTTGAGATTTCCAGAGTGATATTGCAAGCTGATCCATCCCTTCCTCATGCTTTATGGGAATCTGCTGCATCTGTTCTGTCAAGTATTCTGCAATTTAGCTCTGAATTCTACTTGGAAGTTCCTGTTGCTGTGTTGGTAAGGTTGCTTCGATCTGGCTCGGAGAGCACAGTTATCGGTGCATTAAATGCACTTCTGGTTTTGGAAAGTGACGATGGAACTAGTGCAGAAGCTATGGCTGAAAGTGGTGCAATAGAGGCTCTCTTGGAGCTTCTAAGATCTCATCAGTGTGAGGAAACCGCTGCACGACTCTTAGAAGTACTGCTTAACAACGTAAAGATAAGAGAAACGAAAGTCACTAAATCAGCCATCTTACCGTTATCACAGTATCTCTTGGACCCACAAACCCAAGCACAGCACGCAAGGTTATTGGCAACTTTGGCTCTTGGAGATTTGTTCCAGAACGAGGCTCTTGCTCGATCTGGTGATGCAGTTTCTGCCTGTCGTGCTTTAGTGAATGTGCTTGAAGACCAACCGACCGAAGAAATGAAAGTCGTAGCCATATGTGCTTTACAAAATCTTGTGATGTACAGTCGACCAAATAGAAGAGCGGTTGCAGAGGCCAGTGGTGTTCAGGTTGTATTGGATTTGATAGGTTCAAGTAATCCTGAAACTTCTGTTCAGGCTGCAATGTTTATTAAACTTCTGTTTTCAAATAATACTATTCAAGAATATGCTTCTAGCGAAACAGTGAGAGCACTCACTGCCACTATTGAAAAAGATTTATGGGCGAGTGGAACTGTGAACGAGGAATATCTGAAAGCATTAAATTCTCTATTCAGCAACTTTCCACGACTGAGAGCAACCGAACCGGCAACACTTAGCATTCCCCATCTGGTAACAGCCTTAAAGACAGGTTCGGAGGCTTGTCAGGAAGCTGCATTGGAGGCACTTTTTCTTCTCAGACAAGCTTGGTCAGCATGCCCTGCTGAAGTCTCAAGAGCTCAGTCAATTGCAGCTGCAGATGCTATTCCTTTTCTGCAGTACTTAATCCAGTCTGGCCCACCTCGATTTCAGGAGAAGGCAGAATTTTTATTGCAGTGTTTGCCAGGTACATTGGTGGTGATCGTCAAGCGTGGTAACAATATGAGACAGTCTGTTGGAATCCCGAGTGTTTACTGCAAGATTACACTTGGCAACTCCCCGCCGAAGCTAACAAAGGTGGTCTCAACTGGTCCTAACCCGGAGTGGGAGGAGAGCTTTACATGGTCCTTTGAGAGTCCTCCAAAAGGCCAGAAGCTTCATATTTCTTGCAAAAACAAGAGCAAAGTGGGAAAGAGTAAATTCGGAAAAGTAACAATCCAAATTGATCGAGTGGTAATGCTAGGAGCCGTAGCTGGTGAGTACACTCTATTGCCTGCAAGTAAAAGTGGACCCCCAAGGAATCTAGAAATTGAATTTCAATGGTCTAACAAAGTAAGTGATACAACAACTGATACAGTTCAGCAATAG 6366 0.4304 MGLRDRSSSMEDPDGTLASVAQCIEQLRQSSSSVHEKEYSLRQLLDLIDTRENAFSAVGSHSQAVPVLVSLLRSGSLNVKIQAATVLGSLCKENELRVKVLLGGCIPPLLGLLKSNSTEGQIAAAKTIYAVSQGGARDHVGSKIFSTEGVVPVLWQQLRTGLKTGNVVESLLTGTLKNLSSNAEGFWNATIQAGGVDILVKLLATGQPSTLANVCFLLASVMMEDASVCSKVLNAEVTKQLLKLLGPGNDDLVRAEAAGALKSLSAQCKEAKREIASSNGIPALINATIAPSKEYMQGECAQALQENAMCALANISGGLSYVISSLGQSLESCSSPTQTADTLGAIASALMIYDNKAESTKPSDPLVVEQTLLKQFKPRLPFLVQERTIEALASLYGNPILSTKLENSHGKHLLVGLITMAADEVQDELIKALLALCKNEGSLWRALQGREGVQLLISLLGLSSEQQQECAVALLCLLSNENDESKWAITAAGGIPPLVQILETGSAKAKEDSARILKNLCNHSEDIRACVESADAVPALLWLLKNGSPNGKDIAAKTINHLIHKSDTTTISQLTALLTSDLPDSKIYVLDALRSMLCVAPLSDILREGSAAGDAFDTMIMLLSATKEETQAKSASALAEIFEARKDLRESSIAVKALCSSMKLLDFESENILMESSNCLAAIFLSINENKDVAAVAKDTLTPLVALANSSVLEVAERAIGAVANLILDIGIAKKVVAEEVILPATRVLHEGTISGKTHAAAAIARLLHSQKVNNAVTDCVNRAGTVLALVSFLDSSASGSVDTSEALEALAILSRPEETGANIKPACAVLAEFPKSIRPIVLCIANSTPTLQDKTIEILSRLCKDQPVIIGDTIASASGCISSIAKRIISSTNVKVKIGGIALLICAAKENPQRLVEDLNISNLSANLTQSLVDILISAQPSLGNHGDDDNDKESISICRHTKEEANSHESKTGTSIIRGVDLAIWLLSILACHDEKNKIAIMKAGAIDVLADRISNCYSQYSQIDYKEDNSMWICALLLAILFQDRDIIRAHSTIKSVPALANLLKSEESANKYFAAQSIASLVCNGSRGTLLSVTNSGAAGGLISLLGCADTDIHELLELSEEFSLVRYPDQVALEKLFRVDDIRVGATSRKAIPALVDLLKPIPDRPGAPFLALGLLTQLGRDCPPNKTVMVESGALEALTKYLSLGPQDATEEAATDLLGILFSSADIRKHDSAFGAVNQLVAVLRLGGRGARYSAAKALESLFSADHIRNADIARQAVQPLVEILNTGSEREQHASIAALVGLLSENPSRALAVADVEMNAVDVLYRILSSNCSMDLKGDAAELCCALFGNTRIRSTAAAARCVEPLVSLLATEFSPAHHSVVRALDRLVDDEQLAEMVAAHGAVVPLVSLLSGRNYVLHEAISRALVKLGKDRPACKMEMVKAGVIESILDILHEAPDYLLAAFAELLRILTNNATIAKGPWAAKVVEPLFLLLARHDFVPDGQHSAMQVLVNILEHPQCRADYSLTSRKVIEPLIPLLDSPISIVQQLAAELLSHLLLEEHLQKDPVTPKVIAPLIRILGSGIPLLQQRAVKALVSIALTWPNEIAKEGGVVEISRVILQADPSLPHALWESAASVLSSILQFSSEFYLEVPVAVLVRLLRSGSESTVIGALNALLVLESDDGTSAEAMAESGAIEALLELLRSHQCEETAARLLEVLLNNVKIRETKVTKSAILPLSQYLLDPQTQAQHARLLATLALGDLFQNEALARSGDAVSACRALVNVLEDQPTEEMKVVAICALQNLVMYSRPNRRAVAEASGVQVVLDLIGSSNPETSVQAAMFIKLLFSNNTIQEYASSETVRALTATIEKDLWASGTVNEEYLKALNSLFSNFPRLRATEPATLSIPHLVTALKTGSEACQEAALEALFLLRQAWSACPAEVSRAQSIAAADAIPFLQYLIQSGPPRFQEKAEFLLQCLPGTLVVIVKRGNNMRQSVGIPSVYCKITLGNSPPKLTKVVSTGPNPEWEESFTWSFESPPKGQKLHISCKNKSKVGKSKFGKVTIQIDRVVMLGAVAGEYTLLPASKSGPPRNLEIEFQWSNKVSDTTTDTVQQ 2121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04299 2121 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 493 535 IPR000225 GO:0005515
Mepo2g04299 2121 SUPERFAMILY ARM repeat 984 1119 IPR016024 -
Mepo2g04299 2121 Gene3D - 776 1129 IPR011989 -
Mepo2g04299 2121 Gene3D C2 domain 1989 2119 IPR035892 -
Mepo2g04299 2121 SMART C2_3c 1990 2086 IPR000008 -
Mepo2g04299 2121 CDD C2 1991 2081 - -
Mepo2g04299 2121 SUPERFAMILY ARM repeat 618 941 IPR016024 -
Mepo2g04299 2121 FunFam Protein CELLULOSE SYNTHASE INTERACTIVE 1 1989 2110 - -
Mepo2g04299 2121 ProSiteProfiles C2 domain profile. 1970 2087 IPR000008 -
Mepo2g04299 2121 SUPERFAMILY ARM repeat 1367 1615 IPR016024 -
Mepo2g04299 2121 Coils Coil 254 274 - -
Mepo2g04299 2121 SMART arm_5 1440 1480 IPR000225 GO:0005515
Mepo2g04299 2121 SMART arm_5 482 522 IPR000225 GO:0005515
Mepo2g04299 2121 SMART arm_5 1524 1566 IPR000225 GO:0005515
Mepo2g04299 2121 SMART arm_5 1188 1229 IPR000225 GO:0005515
Mepo2g04299 2121 SMART arm_5 1689 1728 IPR000225 GO:0005515
Mepo2g04299 2121 SMART arm_5 1816 1856 IPR000225 GO:0005515
Mepo2g04299 2121 SMART arm_5 225 266 IPR000225 GO:0005515
Mepo2g04299 2121 SMART arm_5 93 133 IPR000225 GO:0005515
Mepo2g04299 2121 SMART arm_5 1357 1397 IPR000225 GO:0005515
Mepo2g04299 2121 SMART arm_5 50 92 IPR000225 GO:0005515
Mepo2g04299 2121 SMART arm_5 268 317 IPR000225 GO:0005515
Mepo2g04299 2121 SMART arm_5 689 728 IPR000225 GO:0005515
Mepo2g04299 2121 SMART arm_5 1143 1186 IPR000225 GO:0005515
Mepo2g04299 2121 SMART arm_5 524 564 IPR000225 GO:0005515
Mepo2g04299 2121 SMART arm_5 774 816 IPR000225 GO:0005515
Mepo2g04299 2121 SMART arm_5 1398 1438 IPR000225 GO:0005515
Mepo2g04299 2121 SUPERFAMILY ARM repeat 1578 1987 IPR016024 -
Mepo2g04299 2121 Gene3D - 7 363 IPR011989 -
Mepo2g04299 2121 FunFam Protein CELLULOSE SYNTHASE INTERACTIVE 1 1339 1573 - -
Mepo2g04299 2121 Gene3D - 1422 1575 IPR011989 -
Mepo2g04299 2121 SUPERFAMILY ARM repeat 383 728 IPR016024 -
Mepo2g04299 2121 SUPERFAMILY ARM repeat 26 351 IPR016024 -
Mepo2g04299 2121 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1989 2097 IPR035892 -
Mepo2g04299 2121 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 3 2110 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Mepo2g04299 2121 SUPERFAMILY ARM repeat 1141 1393 IPR016024 -
Mepo2g04299 2121 Gene3D - 1136 1419 IPR011989 -
Mepo2g04299 2121 Gene3D - 1576 1988 IPR011989 -
Mepo2g04299 2121 Gene3D - 364 775 IPR011989 -
Mepo2g04299 2121 Pfam Armadillo/beta-catenin-like repeat 482 521 IPR000225 GO:0005515
Mepo2g04299 2121 Pfam Armadillo/beta-catenin-like repeat 61 91 IPR000225 GO:0005515
Mepo2g04299 2121 Pfam C2 domain 1989 2080 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04299 Mepo-Chr2 51632221 51642179 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04299 445 577 U-box Gene Family AT2G23140 39.259 9.76e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04299 - - cam:101494820 3692.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g04299 2 51632221 51642179 Mepo2g04299 2 51632221 51642179 ECH
Mepo2g04299 2 51632221 51642179 Mepo3g06357 3 77642756 77651838 PCT