Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04281 ATGGCAACAACTATAGACATGTACAATAGCAACAAAAACATGACACTTGGTTTGTTAGATCCATATAATGAAGAATTCATGAAAGCACTCGAGCCTTTTATGAAAACTAGTTCTTCTTCATCAATCTCTGAACAATCTCCACTTACACCAAATTTGAATCCCAATTACTTCAACTACAGAACCCAAGCAAGTTCCATTGGTCTCAACCAACTCACACCATCACAAATCCTTCAAATTCAAACCCAATTCCAAACCCGCCAACAACAACAACAAAATAAATCCCTTACCCAAAAGCCAGTTCCCATGAAGCATTTTGGAATTCCCTCAAAACCGACGAAACTCTACCGCGGAGTTAGACAACGTCATTGGGGAAAATGGGTTGCTGAAATAAGACTTCCAAAAAACCGCACACGTCTATGGTTAGGTACATTTGATACAGCAGAGGAAGCAGCTTTTGCTTATGATAACGCAGCTTATAAGCTTAGAGGTGAATTTGCACGTCTCAATTTTCCTCACACGCGCTTCCATGGAAACTACAATCCGCTCCCTTCCTCGGTTGATTCAAAACTGCAAGCTATTTGTGAAACTTTAGCTATTTCTCAAAAACAGGGTAACACAGAAAAGCCCTGTTCCTTTGTTGAAGATGTAAAGCCTCTGGTACATGTTCCTGCACAATCCAAGGGTGAATTAGTGTTTGAGGATTTGAAGGTTGAGAAGACGGTGTTTTCGTCTATGTCTGATGAATGTTCACTTGGATTGTCTTCACCAGAATCAGGTGTTACTTTCTTGGATTTCTCAGATTCTAGCCAGTGGGATGAAGTGGAGAATTTTGGGTTGAAGAAGTTCCCTTCTGTTGAAATTGATTGGGAAGCCTTATGA 879 0.4039 MATTIDMYNSNKNMTLGLLDPYNEEFMKALEPFMKTSSSSSISEQSPLTPNLNPNYFNYRTQASSIGLNQLTPSQILQIQTQFQTRQQQQQNKSLTQKPVPMKHFGIPSKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAAFAYDNAAYKLRGEFARLNFPHTRFHGNYNPLPSSVDSKLQAICETLAISQKQGNTEKPCSFVEDVKPLVHVPAQSKGELVFEDLKVEKTVFSSMSDECSLGLSSPESGVTFLDFSDSSQWDEVENFGLKKFPSVEIDWEAL 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04281 292 Pfam AP2 domain 115 164 IPR001471 GO:0003700|GO:0006355
Mepo2g04281 292 ProSiteProfiles AP2/ERF domain profile. 114 171 IPR001471 GO:0003700|GO:0006355
Mepo2g04281 292 FunFam Ethylene-responsive transcription factor 2 113 172 - -
Mepo2g04281 292 SMART rav1_2 114 177 IPR001471 GO:0003700|GO:0006355
Mepo2g04281 292 CDD AP2 113 173 IPR001471 GO:0003700|GO:0006355
Mepo2g04281 292 PRINTS Ethylene responsive element binding protein signature 137 153 IPR001471 GO:0003700|GO:0006355
Mepo2g04281 292 PRINTS Ethylene responsive element binding protein signature 115 126 IPR001471 GO:0003700|GO:0006355
Mepo2g04281 292 Gene3D AP2/ERF domain 114 173 IPR036955 GO:0003700|GO:0006355
Mepo2g04281 292 SUPERFAMILY DNA-binding domain 114 172 IPR016177 GO:0003677
Mepo2g04281 292 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 4 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04281 Mepo-Chr2 51499736 51501357 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04281 5 292 AP2-EREBP Transcription Factor Family AT4G39780 52.703 2.21e-87 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo2g04281 AP2 8.4e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04281 K09286 - gmx:100818839 303.908