Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04280 ATGACTCAAAAGAATGTGGTTGTGTCTGAGACCAAAACCGGAATGAATGGTAGCGGTACTATTACCGTGGCACAGAAGCCACCGGCAGCACCCGGTGGATACATTCACATTCCAAGGAGGAGAATTTTGAAGAATCTTGAAATCAATGGAGGACAGAGAATCAATACATGGATTGATTCTATGAGAGCTTCTTCTCCAACTCATGCCAAATCTTCTCCTTCTTTAGCTGAAGAATACAATTCTTGGATTCTTCGCCATCCATCTGCATTAGATATGTTTGAACAAATTATGGATGCTGCAAAGGGAAAACAGATTGTTATGTTTTTGGATTATGATGGTACTTTGTCACCAATTGTCGATGACCCCGACCGTGCTTTCATGTCTGAATCGATGAGGAAAACAGTTAAGAAACTTGCAAGGTGTTTTCCTACTGCAATTGTTACTGGAAGATGCATAGACAAAGTGTACAATTTTGTTCGTTTGGATGAACTATATTATGCTGGAAGTCATGGCATGGATATTAAAGGGCCAACAAAAGAGTCCAAATACAACAAAAATAACAAAGCAGAGGAAGTACTTTTTCAACCTGCCAGAGAATTTGTTCCCATGATAAATGAGGTTTACGAACAACTAGTTGAGAAAACAAAATCAACTCCTGGTGCCAGAGTTGAGAACCACAAGTTCTGCACCTCTGTTCATTTTAGATGTGTTGATGAAAAGAGATGGGTTGAATTGGCACAGCAAGTAAAATCCGTGTTAAAAGAGTACCCGAAGCTTCGTCTAACACAAGGAAGGAAGGTATTGGAGATTCGTCCCGCAATTAAATGGGACAAGGGCAAGGCCCTCGAATTTTTGCTAGAGTCACTTGGATTTGCCAACTGTAACGATGTATTTCCTGTTTATATTGGTGATGATAGAACCGATGAAGATGCATTCAAGAAATTAAGAGACATAGATCAAGGTTTTGGAATTCTAGTCTCTAAGTTTCCTAAGGACACAGCTGCTGCATACTCTTTACAAGAGCCCAATGAGGTTATGGATTTCCTTCAGCGTTTGGTCGAGTGGAAAAAAACATCTCCAAGATCACGTTCTAGGGTGTAA 1101 0.4015 MTQKNVVVSETKTGMNGSGTITVAQKPPAAPGGYIHIPRRRILKNLEINGGQRINTWIDSMRASSPTHAKSSPSLAEEYNSWILRHPSALDMFEQIMDAAKGKQIVMFLDYDGTLSPIVDDPDRAFMSESMRKTVKKLARCFPTAIVTGRCIDKVYNFVRLDELYYAGSHGMDIKGPTKESKYNKNNKAEEVLFQPAREFVPMINEVYEQLVEKTKSTPGARVENHKFCTSVHFRCVDEKRWVELAQQVKSVLKEYPKLRLTQGRKVLEIRPAIKWDKGKALEFLLESLGFANCNDVFPVYIGDDRTDEDAFKKLRDIDQGFGILVSKFPKDTAAAYSLQEPNEVMDFLQRLVEWKKTSPRSRSRV 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04280 366 Pfam Trehalose-phosphatase 108 342 IPR003337 GO:0003824|GO:0005992
Mepo2g04280 366 NCBIfam HAD-IIB family hydrolase 107 315 IPR006379 -
Mepo2g04280 366 FunFam Trehalose 6-phosphate phosphatase 197 273 - -
Mepo2g04280 366 FunFam Trehalose 6-phosphate phosphatase 105 192 - -
Mepo2g04280 366 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 33 361 IPR044651 GO:0004805|GO:0005992
Mepo2g04280 366 Gene3D - 105 203 IPR023214 -
Mepo2g04280 366 Gene3D - 209 365 IPR023214 -
Mepo2g04280 366 CDD HAD_TPP 106 346 - -
Mepo2g04280 366 FunFam Trehalose 6-phosphate phosphatase 203 362 - -
Mepo2g04280 366 NCBIfam trehalose-phosphatase 103 353 IPR003337 GO:0003824|GO:0005992
Mepo2g04280 366 SUPERFAMILY HAD-like 106 356 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04280 Mepo-Chr2 51453894 51457035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04280 107 366 Trehalose Biosynthesis Gene Families AT1G60140 25.714 3.09e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04280 K01087 - gmx:100794430 621.313