Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04268 ATGTCTCATCCAACGACTACAAAGCATGATGTGTTCCTCAGCTTCCGAGGAGAGGACACTCGTGACAACTTCACGAGTCATCTTTATGCAGAATTGTGTAGAAAAAATATTGAAACATTTATAGATTATAGACTTGGCAGAGGCGAAGAAATTTCACCAGCACTACACAAAGCAATAGAAGAATCAACAATTTATGTTGTCATTTTGTCAGAAAAGTATGCTTCTTCCACGTGGTGCTTGGATGAACTCAAAAAGATACTGGAATGTAAGGAGAGATATGGAAGGGAAGTGATACCTGTTTTCTATAAGGTGGATCCATCAAATGTTAGGCATCAGAGACAGAGCTATGCGGACGATTTTGTTAAACATCAACAGCGATTTGGCGGTAAAGTGGACGAGTGGAAAGCTGCTCTAACCCAAGTAGCTGGACTCTCGGGCTGGGATTCACAAGTAACCAGACCAGAACACACACTTGTTAGAGAGATTGTGAAAGATATTTTGAGAAAATTGAATCATTGTGTTTTAAGCGATGATCAAGGAATGATTGGAATTGAAAAGCATATTGAACAAATCCAATCCTTGTTGCACCTCGAGTCATGGACTGTTCGTATCATAGGAATATGGGGCATGGGAGGGATGGGCAAAACAACAATTGCCAATGCAATCTATCATAAACTTGCAACTCAGTTCAGTTGCAGAAGCATTGTTCTAAATGTTCAGCAAGAAATAGAAAGAGCTGGACTAGACCATGTACGAAGAAAATACTTATCCGAACTTCTAGATGAAGACATTACATCCTCTAAATCCAATTTTTCATACATTCCGAGGCTTCAACGAGCAAAGGTTCTCCTTGTTCTTGATGACGTGAACGATTCAGATCAACTTGAAGGTTTAATTGGTTGTAGTAACTTTGGCCTGGGGAGTAGAATCATTGTGACTAGTAGAGACAAGCAAGTGCTTGAGAATGCCAATGCTAATGAAATATATGAAGTTAGGCAGATGGATTTTCAAGATTCTCTACGACTCTTCTGTTTAAATGCTTTTAAACAAAAGTATCCAATAGAAACTTATGTGAGCTTATCGGAAAAGGTATTAAATTATGCTAAAGGAGTTCCATTAGTTCTCAAAGTTTTGGGCTTATTGCTTCACGGAAGAACAAAGGAAGCATGGGTCAGTGAGTTGCAAAAGCTTGAAAAGTTTCCTGATCTTAAAACTTTCAAAGTGCTGAGTTTAAGTTATGATGGACTTGACGACGAACAAAAGAATATATTTCTTGACATAGCTTGCTTCTACAGAGGACATTTGGAGAATGTTGTGTCACAAACATTAGATCGTTGTGGTTTCTCTGCTCACATTGGAATGGACGTTCTCAAAGACAGGTGTCTTATATCTGTTTCAGAAGGTAGAATTGTGATGCATGATCTAATACAAGAGATGGGACATGAAATAGTTCGGCAACAATGTGTCAATGATCCTGGAAAGCGAAGTCGATTATGGAAGCCTGATGATATTTATGACGTTTTAAGAAAGAACAAGGGAAAGGGAACTGATGCAATTGAGTGTATATTCCTGGACATATGCAAGATAAAGAAAGTTCAACTACATGCTGAAACTTTCAAGAAAATGCATAATCTAAGAATGATCCAGTTCTATAATCCTTCTATACATTTTAGGACAAATTCAAATGTGATGCTTCATGAGTTTCTTAAGAGTCTACCAGATGATTTAAAATTTTTTCGTTGGGATGGCTTTCCTCAAAGATCATTGCCACAAGATTTTTGCCCAGAATATCTTGTTACACTTGATCTGCCTCATAGCCCTCTTGAACAACTTTGGGAGGGGGATAAGGCTTTACCAAATTTAAAAAGGCTCAACCTTAGTTATTGTTGGAGGCTGATGGAACTACCAGACCTCTCTTTGTCCCCAAATATTGAAGAAATAATTCTCAGTAATTGTGTAAGGTTGGTGCAAGTTTACTCGTCGAGCTTCCTAAGCAAACTCAACTGTTTATGTTTAAATGGTTGTATCACGCTGAAGAGTTTAAGTCTTCCCAGTAACATTCTATCAAAATCTTCTGGATTAGTTGTTCTCCATGGTTGTCGCAACCTTGAAACACTTTTAATAAGTTGTAGAACTGATGCAGTTCAATCATACAGTTGTTCACATTTTAATGGATTCTGGGACGGGGAAAATTTTAAAGATGAAGATAAAGTAGTAATGCTGCCTAGTGTTTCCGATTTCGGGGTGGCACAAAATTCGGGGGGTTACGAGATTGGGGAATACTCTTCACATTCTTTTGAGTTTAACCCCATTGTTGATGCTGACAGATACGAAAAAGGAGAACCATTAGACAATATATGCTTATTAAACATGAAAGTGATGATAAAGACCATGCCCTCGTTGTATACAAGTATCAACGAGCTTTGTTGGTTAGATATCTCTAGTTGTGAATCTCTTACATGCCTACCAGCTGAACTTTTCAATTTGAATTCTCTGAGAAGACTTTATCTCGGTGGTTGTTTAAATTTGGAGGAGTTACCTGAAATCGAGGAGACTATGGAAAATCTAACAGTGCTCATCTTAGACAAAACAGCAATAAAAGAATTACCATCATCCTTGCACCATTTGGTCAGGCTTGAAGAGTTGAGCTTGCAAATGTGCACAAGACTTGAGACGATTCCAGCTTCCATTGGAAGTCTCAGCAAACTCTTCAAGTTAGACCTTACCTACTGTGAATCACTTGAAACCTTTCCAAGCAGCATTTTCAACTTGAAGCTTACAAAACTCGATTTACATGGTTGCTCAATGCTTAGTACCTTCCCAGAGATCTTGGAGCCTGCAGAAAGTTTTGCTCACGTTAACTTAACAAAAACAGCAATTAAAGATCTGCCTTCATCAGTGGAGTATTTGGTTGGGCTTCAAACCTTGCGCCTTAAACTGTGCAGTAATCTGGTGTCGCTTCCAAACGGCATTGTTAATCTAAATCATCTATCCCTGCTTGATTGTTCTGGCTGTGGCAGGTTAACAGGTATCCCAAATGACATCGGTCACTTGTCATCGTTGACAGAACTTTCACTACAAGAAAGCAGCATTGTGAACCTTCCTGAGAGTATGGCTCATCTCTCAAGTTTGAAATCACTTGATTTAAGTGACTGCAAAAGGCTTGAATATATTCCAAAGCTTCCACCAAATCTAAACCAGGTTTCGGCATTTGATTGCCCATCCATTAAGAGAATGGTGCCAAATTCAAGGTTGAAACTCCTGTCTGATTCCAAAGAATGTACCTTCAAATTTTATTTCACCAATAGTCAACAACACGGTGCATACTTTCGGGGTGGTATTGGAGACGAAGCATGGATTAGGATCAATGATGAATATAAGTCAGTGTTCTTCTGTTTTCCAGGGAGTGTAGTTCCTGGTTGGTTCCCTTTCCCTTACCGTTGCCAGGGACATTCAGTAACCATGAATAAAGTTTCTCCATATTGGTGTGGTAAAAATAGGCTCGTTGGATTAGCTCTGTGTGTTGTTTTGGGACAGGAAGACATGTATAACACAAGAACAAGAGGTGGTAACTTTACGTACAGACTATCATTTGAATCTGAGGGCCAACAACACTTTCTTCCCAAGCATGAGCTAAAAAACTATTTCCACTGGAAGGGTCGAGATAGGTTTTTTGTTCAAGATCACACATTCCTATGGAAATATCAATTGGACTTTGAAAGAATTGGAAGAAAGCTATTTCATGCCCAATACTTCACTTTTGAGATCCAACAAGACTATCATCATCACTCAAGTTTTGAAAATGATTATTTCTCAGGTTTTCAATCAACCGTCACGGTGAAGGAGTGTGGAATATGTCCTCTGTATACCAAATAA 3876 0.3873 MSHPTTTKHDVFLSFRGEDTRDNFTSHLYAELCRKNIETFIDYRLGRGEEISPALHKAIEESTIYVVILSEKYASSTWCLDELKKILECKERYGREVIPVFYKVDPSNVRHQRQSYADDFVKHQQRFGGKVDEWKAALTQVAGLSGWDSQVTRPEHTLVREIVKDILRKLNHCVLSDDQGMIGIEKHIEQIQSLLHLESWTVRIIGIWGMGGMGKTTIANAIYHKLATQFSCRSIVLNVQQEIERAGLDHVRRKYLSELLDEDITSSKSNFSYIPRLQRAKVLLVLDDVNDSDQLEGLIGCSNFGLGSRIIVTSRDKQVLENANANEIYEVRQMDFQDSLRLFCLNAFKQKYPIETYVSLSEKVLNYAKGVPLVLKVLGLLLHGRTKEAWVSELQKLEKFPDLKTFKVLSLSYDGLDDEQKNIFLDIACFYRGHLENVVSQTLDRCGFSAHIGMDVLKDRCLISVSEGRIVMHDLIQEMGHEIVRQQCVNDPGKRSRLWKPDDIYDVLRKNKGKGTDAIECIFLDICKIKKVQLHAETFKKMHNLRMIQFYNPSIHFRTNSNVMLHEFLKSLPDDLKFFRWDGFPQRSLPQDFCPEYLVTLDLPHSPLEQLWEGDKALPNLKRLNLSYCWRLMELPDLSLSPNIEEIILSNCVRLVQVYSSSFLSKLNCLCLNGCITLKSLSLPSNILSKSSGLVVLHGCRNLETLLISCRTDAVQSYSCSHFNGFWDGENFKDEDKVVMLPSVSDFGVAQNSGGYEIGEYSSHSFEFNPIVDADRYEKGEPLDNICLLNMKVMIKTMPSLYTSINELCWLDISSCESLTCLPAELFNLNSLRRLYLGGCLNLEELPEIEETMENLTVLILDKTAIKELPSSLHHLVRLEELSLQMCTRLETIPASIGSLSKLFKLDLTYCESLETFPSSIFNLKLTKLDLHGCSMLSTFPEILEPAESFAHVNLTKTAIKDLPSSVEYLVGLQTLRLKLCSNLVSLPNGIVNLNHLSLLDCSGCGRLTGIPNDIGHLSSLTELSLQESSIVNLPESMAHLSSLKSLDLSDCKRLEYIPKLPPNLNQVSAFDCPSIKRMVPNSRLKLLSDSKECTFKFYFTNSQQHGAYFRGGIGDEAWIRINDEYKSVFFCFPGSVVPGWFPFPYRCQGHSVTMNKVSPYWCGKNRLVGLALCVVLGQEDMYNTRTRGGNFTYRLSFESEGQQHFLPKHELKNYFHWKGRDRFFVQDHTFLWKYQLDFERIGRKLFHAQYFTFEIQQDYHHHSSFENDYFSGFQSTVTVKECGICPLYTK 1291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04268 1291 Gene3D - 334 417 IPR042197 -
Mepo2g04268 1291 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 709 IPR044974 GO:0006952
Mepo2g04268 1291 Pfam TIR domain 8 178 IPR000157 GO:0007165
Mepo2g04268 1291 Gene3D - 4 172 IPR035897 -
Mepo2g04268 1291 SMART till_3 8 144 IPR000157 GO:0007165
Mepo2g04268 1291 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 147 IPR035897 -
Mepo2g04268 1291 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 171 427 IPR027417 -
Mepo2g04268 1291 SUPERFAMILY L domain-like 791 1077 - -
Mepo2g04268 1291 Gene3D Ribonuclease Inhibitor 926 1086 IPR032675 -
Mepo2g04268 1291 Pfam NB-ARC domain 185 400 IPR002182 GO:0043531
Mepo2g04268 1291 Pfam C-JID domain 1133 1290 IPR045344 -
Mepo2g04268 1291 PRINTS Disease resistance protein signature 276 290 - -
Mepo2g04268 1291 PRINTS Disease resistance protein signature 204 219 - -
Mepo2g04268 1291 PRINTS Disease resistance protein signature 898 914 - -
Mepo2g04268 1291 PRINTS Disease resistance protein signature 368 382 - -
Mepo2g04268 1291 Pfam Leucine Rich Repeat 597 616 IPR011713 -
Mepo2g04268 1291 ProSiteProfiles TIR domain profile. 7 170 IPR000157 GO:0007165
Mepo2g04268 1291 Gene3D Ribonuclease Inhibitor 782 925 IPR032675 -
Mepo2g04268 1291 Gene3D - 173 331 IPR027417 -
Mepo2g04268 1291 Gene3D Ribonuclease Inhibitor 497 731 IPR032675 -
Mepo2g04268 1291 SUPERFAMILY "Winged helix" DNA-binding domain 406 508 IPR036390 -
Mepo2g04268 1291 FunFam Disease resistance protein (TIR-NBS-LRR class) 5 172 - -
Mepo2g04268 1291 SUPERFAMILY L domain-like 520 709 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04268 Mepo-Chr2 51368033 51375173 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04268 807 990 WRKY Transcription Factor Family AT4G12020 33.155 2.22e-16 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04268 - - tpra:123916959 1485.7