Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04242 ATGGACTTCTTATTTGTACTATTGCTGTTGGGTTGCTTCTATTCATTTGTGTTACCTGATTCACAAGGAGATGCACTGATTGCATTGAAGTTATCACTGAATGCTTCAGGTCAACAGCTTAGTGACTGGAATGAAAATCAAGTCAACCCTTGTACCTGGTCGCGCGTTAACTGTGACTTTAACAACAATGTTAATCAAGTTTCACTAGCGATGATGGGATTCCCAGGACACTTGACCCCAAGGATAGGAGCTCTAAAATTTCTCGAAACTCTTTCTTTGCAAGGAAATGGCATCACTGGCGACATACCAAAAGAGTTCGGAAACCTGACAAGCTTGATCAGGTTGGATTTGGAAAACAACAGATTAACTGGTGAAATACCGTCTTCCTTTGGTAATCTGAAAAAGCTCCAATTCTTGACATTGAGTCAAAACAATCTCAGTGGAACTATTCCTGAATCACTTGCCAATATATCAAGCTTGAGCGAAATCCAGCTAGATTCAAATAATCTTAGCGGCCGAATTCCACAGCATTTATTTCAAGTTCCTAAATACAATTTCAGTGGAAATACTTTGTATTGTGGTGTGAGTTATGATCAACCTTGTGCATATAATAACAATGCAGATCAAGGTTCATCACATAAACCAACTGGCCTCATAATTGGGATTAGCATAGCGTTTATAGCTATCCTTGTTATTGGTGGTCTGCTGCTATTTTGGTGCAAGGGTAGACACAAGGGCTACAAGCGTGAAGTTTTTGTTGACGTTGCAGGTGAAGTTGATCGGCGAATTGCGTTTGGTCAACTAAGAAGATTTGCATGGAGAGAACTACAAATAGCTACTGACAACTTCAGTGAAAAAAATGTTTTAGGACAGGGAGGCTTTGGAAAGGTTTATAAAGGCGTCCTTGCTGATAACACAAAAGTTGCTGTCAAAAGGTTAACTGATTATGAAAGCCCTGGTGGGGATGCAGCTTTCACGCGTGAAGTTGAGATGATAAGTGTAGCTGTTCATAGGAACTTGTTACGGCTGATTGGGTTTTGTACTACTCCAACTGAGCGCCTCTTGGTTTATCCCTTCATGCAGAACTTAAGTGTCGCATATCGTCTACGAGAACTCAAAGCTGGGGAAGCTGTTTTGGATTGGCCTACGAGAAAACGAGTGGCTCTGGGAACTGCACGGGGCCTAGAATATCTTCATGAGCATTGCAATCCTAAGATTATTCATCGTGATGTGAAGGCAGCTAATGTATTACTAGACGAAGATTTTGAGGCAGTTGTCGGTGACTTTGGTTTGGCAAAGTTAGTTGACATTCGAAAGACTAATGTGACAACTCAAGTTCGCGGGACAATGGGTCACATAGCTCCTGAATATCTGTCGACCGGAAAATCTTCAGAAAGGACTGATGTTTTTGGTTACGGGATTATGCTTCTGGAGCTTGTTACAGGTCAACGCGCAATCGACTTTTCACGTTTGGAAGAGGAAGACGATGTGCTGTTGCTTGACCATGTTAAGAAATTAGAACGAGAGAAAAGACTAGAAGCTATTGTTGATCGCAACCTAAATAAAAATTACAACATGCAAGAGGTAGAAATGATGATAAAAGTTGCATTACTGTGCACTCAAGCAACCTCGGAGGACCGTCCCCTGATGTCTGAGGTTGTAAGAATGCTAGAAGGAGAAGGGTTGGCCGAAAGGTGGGAGGAATGGCAGCATGTGGAGGTGAATCGGAGGCAAGAATACGATAGATTACAAAGAAGATTTGATTGGGGAGAAGATTCAGTTTATAATCAAGATGCCATTGAGTTATCTGGTGGGAGATGA 1821 0.4174 MDFLFVLLLLGCFYSFVLPDSQGDALIALKLSLNASGQQLSDWNENQVNPCTWSRVNCDFNNNVNQVSLAMMGFPGHLTPRIGALKFLETLSLQGNGITGDIPKEFGNLTSLIRLDLENNRLTGEIPSSFGNLKKLQFLTLSQNNLSGTIPESLANISSLSEIQLDSNNLSGRIPQHLFQVPKYNFSGNTLYCGVSYDQPCAYNNNADQGSSHKPTGLIIGISIAFIAILVIGGLLLFWCKGRHKGYKREVFVDVAGEVDRRIAFGQLRRFAWRELQIATDNFSEKNVLGQGGFGKVYKGVLADNTKVAVKRLTDYESPGGDAAFTREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLRELKAGEAVLDWPTRKRVALGTARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDIRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLEAIVDRNLNKNYNMQEVEMMIKVALLCTQATSEDRPLMSEVVRMLEGEGLAERWEEWQHVEVNRRQEYDRLQRRFDWGEDSVYNQDAIELSGGR 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04242 606 SUPERFAMILY L domain-like 22 191 - -
Mepo2g04242 606 FunFam Somatic embryogenesis receptor kinase 1 252 359 - -
Mepo2g04242 606 Pfam Leucine rich repeat 88 146 IPR001611 GO:0005515
Mepo2g04242 606 Gene3D Transferase(Phosphotransferase) domain 1 360 577 - -
Mepo2g04242 606 ProSitePatterns Serine/Threonine protein kinases active-site signature. 406 418 IPR008271 GO:0004672|GO:0006468
Mepo2g04242 606 ProSitePatterns Protein kinases ATP-binding region signature. 289 311 IPR017441 GO:0005524
Mepo2g04242 606 ProSiteProfiles Protein kinase domain profile. 283 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g04242 606 Pfam Leucine rich repeat N-terminal domain 19 59 IPR013210 -
Mepo2g04242 606 SUPERFAMILY Protein kinase-like (PK-like) 263 558 IPR011009 -
Mepo2g04242 606 FunFam Somatic embryogenesis receptor-like kinase 1 360 577 - -
Mepo2g04242 606 Gene3D Phosphorylase Kinase; domain 1 252 359 - -
Mepo2g04242 606 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 4 568 - -
Mepo2g04242 606 Pfam Protein kinase domain 284 554 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g04242 606 Gene3D Ribonuclease Inhibitor 19 203 IPR032675 -
Mepo2g04242 606 FunFam Putative LRR receptor-like serine/threonine-protein kinase 19 203 - -
Mepo2g04242 606 SMART serkin_6 283 537 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04242 Mepo-Chr2 51196534 51202669 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04242 1 606 Receptor kinase-like Gene Family AT5G10290 76.073 0.0 928
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Mepo2g04242 Pkinase 1.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04242 - - gmx:100793416 1050.04