Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04215 ATGAAGAGACTTGGCAGCTCTGATTCTTTAGGTGCTCTCATGACAATTTGTCCAACAACAGAAGAAGAGAGTCCAAGGAACAACCAAGTGTATGGAAGGGAATTTCAGTCCATTATGGAAGGACTAGATGAAGAAGGATGTGTTGATGAACCAGGGCAGAAGAAACGAAGACTAAGTGTGGATCAAGTTAAGGCTTTGGAGAAGAATTTTGAAGTTGAAAACAAACTTGAACCAGATAGGAAAGTGAAGCTTGCTCAAGAGCTTGGTTTGCAACCAAGACAAGTTGCTGTTTGGTTTCAAAACCGTCGTGCTAGATGGAAGACCAAACAATTGGAAAGAGATTATGGTGTTCTCAAAGCCAATTATGATGCACTTAAACTTAATTGTGAGAATCTCCAACGTGACAATGAAACCTTACTCAAAGAGGTTAAGGAATTGAAATCAAGATTGCAAATACAAGAAGAAAACACAACTACTGAAAGCGATGTTTGTGTGAAAGAAGAGTTGATAACATTGCAAGAATCAGAAAACACAGCTTCTGATGAAACCGCCATTCTTAGATCCGATTCTAAGGACTTAAACTACGACTGTTTCAAAAACGGTGATGGAGTTGCTTCACTATTTCCCGCGGATTTCAAAGACGGTTCTTCAGATAGCGATTCAAGTGCAATCTTGAATGAAGAATGCAACGCAACAATTTCTTCATCTGGGGTTCTTCAAAATCACAACTTTTTGATGTCTCCTGGTTCTTCTTCCTTGAAGTTTAATTGTTCTGAATCGTCATCATCACCGTCTTCTATGAGCAATTGCTTTCAGTTTCAGACGCAGTTTGTGAAGATGGAAGAGCATAATTTTCTTAGTGCTGATGAGACTTGTGATTTCTTCTCAGATGAACAACCACCAACACTTCAATGGTATTGTTCAGAGGAGTGGAATTAA 939 0.3898 MKRLGSSDSLGALMTICPTTEEESPRNNQVYGREFQSIMEGLDEEGCVDEPGQKKRRLSVDQVKALEKNFEVENKLEPDRKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVLKANYDALKLNCENLQRDNETLLKEVKELKSRLQIQEENTTTESDVCVKEELITLQESENTASDETAILRSDSKDLNYDCFKNGDGVASLFPADFKDGSSDSDSSAILNEECNATISSSGVLQNHNFLMSPGSSSLKFNCSESSSSPSSMSNCFQFQTQFVKMEEHNFLSADETCDFFSDEQPPTLQWYCSEEWN 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04215 312 Pfam Homeodomain 54 107 IPR001356 GO:0003677
Mepo2g04215 312 Gene3D - 52 116 - -
Mepo2g04215 312 FunFam homeobox-leucine zipper protein ATHB-6-like 57 103 - -
Mepo2g04215 312 Coils Coil 108 160 - -
Mepo2g04215 312 CDD homeodomain 53 110 IPR001356 GO:0003677
Mepo2g04215 312 PRINTS Lambda-repressor HTH signature 80 89 IPR000047 GO:0003677
Mepo2g04215 312 PRINTS Lambda-repressor HTH signature 89 105 IPR000047 GO:0003677
Mepo2g04215 312 ProSiteProfiles 'Homeobox' domain profile. 49 109 IPR001356 GO:0003677
Mepo2g04215 312 ProSitePatterns 'Homeobox' domain signature. 84 107 IPR017970 GO:0000981|GO:0006355
Mepo2g04215 312 SUPERFAMILY Homeodomain-like 49 111 IPR009057 -
Mepo2g04215 312 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 43 306 IPR045224 GO:0003700
Mepo2g04215 312 SMART HOX_1 52 113 IPR001356 GO:0003677
Mepo2g04215 312 Pfam Homeobox associated leucine zipper 109 151 IPR003106 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04215 Mepo-Chr2 50909891 50912650 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04215 1 312 Homeobox Transcription Factor Family AT2G22430 47.110 4.80e-84 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mepo2g04215 Homeodomain 6.3e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04215 K09338 - gmx:100796213 428.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g04215 2 50909891 50912650 Mepo2g04215 2 50909891 50912650 ECH
Mepo2g04215 2 50909891 50912650 Mepo3g06305 3 77143902 77146900 PCT