Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04214 ATGGTTTTTCATCTTAGAAATCTCCTTCATTTCTATTACCATGATAGCCCAAGCCCTTCTCCTCAACAATCACCATTTACATACACTCCCTACAACATACTTCATCATTTCCATTTCCATTATATCCACACACTTAGTATCGCTATCATTGCCATGGCTTGCTTTGTTACTACGGCTATGCTTTTTTTCTTCCTTTTCATATCCATAAGAAACTATCACTCGAGAAGACAAAACCATAACCATAACCGCGATAGAAGAAACACGCCGGTATTGTTTGATGTCCATGGTCATAGAGATTCTACTATTTCAAATGATGATGATAATGATGGTGATGAGAGGGCTATTGTTGATCACCCTATATGGTTCATCCGTACCGTAGGGCTTCAACGATCGGTCATAGATTCCATTACAGTCTTCAAATACAAAAAAGACGAAGGACTCGTTGATGGGACAGAGTGTTCTGTTTGTCTTGGTGAATTTCAAGAGGAAGAGAGTCTCAGAATTTTGCCTAAGTGTAGCCATGCTTTTCATATCCCTTGCATTGACACTTGGCTTAGTTCACACAAGAATTGTCCGATGTGTCGCGCACCTGTGGTGAATGATGCTGCAGATGTTAGTATCACAGTCACTGATCAACTTGATTCAATTTCAAATATTTCTGGTGAGACTCAGAATCAAGGACAGATAGAAGAAAACTTTGATAATGTTGTTGGAGCAGGATTAGGATCACATAATGTAGGAGAATTTGATATTGTTATTAGAGTAGATAATGATGATGGTGATTCTGGTGTATCATCTAGTGAAAGATCAAATAAAAACAATGTTGCTTAA 831 0.3803 MVFHLRNLLHFYYHDSPSPSPQQSPFTYTPYNILHHFHFHYIHTLSIAIIAMACFVTTAMLFFFLFISIRNYHSRRQNHNHNRDRRNTPVLFDVHGHRDSTISNDDDNDGDERAIVDHPIWFIRTVGLQRSVIDSITVFKYKKDEGLVDGTECSVCLGEFQEEESLRILPKCSHAFHIPCIDTWLSSHKNCPMCRAPVVNDAADVSITVTDQLDSISNISGETQNQGQIEENFDNVVGAGLGSHNVGEFDIVIRVDNDDGDSGVSSSERSNKNNVA 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04214 276 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 41 203 IPR044675 -
Mepo2g04214 276 Pfam Ring finger domain 152 195 IPR001841 -
Mepo2g04214 276 FunFam RING-H2 finger protein ATL54 128 201 - -
Mepo2g04214 276 SMART ring_2 153 194 IPR001841 -
Mepo2g04214 276 ProSiteProfiles Zinc finger RING-type profile. 153 195 IPR001841 -
Mepo2g04214 276 SUPERFAMILY RING/U-box 132 201 - -
Mepo2g04214 276 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 128 204 IPR013083 -
Mepo2g04214 276 CDD RING-H2_EL5-like 152 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04214 Mepo-Chr2 50898969 50900237 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04214 107 199 C3H Transcription Factor Family AT4G33565 66.667 6.51e-41 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04214 - - mtr:25501862 487.263