Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04190 ATGACGGAGAGTAACGACCGCGCCGCCACCAGTGGTTACCGGAGTACATTTTCACGGTCAGTTTCATGGACAGACCGTTCACCTTCAAACAGAAGGCCGCCAACACCGTCGTCGGCGGCGGTGAAAAACAAACAACGATCGTTGCTTCCACCGCTTCGTCCTCTTTCCATCAACAAACGCAGCATTGGAGAATGGCCAAGTGCTGGATCTGACGATCTCGGAGTTTGGCCAGAGACACCTAGAGGAAGAGGTTCAATCACTGGTTCAGAGTTTCAGTTCACAAGAGACAAGTTAGCTTTCTATGACAAAGAATGTTCCAGAATCGCTGAACATGTTTACCTAGGAAGCGACACAGTGGCGAAGAATCACGAGGTTTTAAGAAAGAATGGGATTACTCACGTGCTTAATTGTGTTGGGTTTGTTTGTCCTGAATATTTCAAAAGTGAATTTGTTTATAAAACTCTTTGGTTGCAGGATAGTCCAACAGAAGATATAACAAGTATTTTGTATGATGTTTTTGATTATTTTGAGGATGTTAGATTACAAGGTGGTCGTGTTCTTGTTCATTGTTGTCAAGGTGTTTCTAGATCAACCTCTTTGGTTATTGCTTATCTTATGTGGAGAGAAGGACAAAGCTTTGAAGATGCTTTTCATTATGTCAAGAATGCTCGTGGTGTTACAAATCCTAACATGGGTTTTGCTTGTCAACTTTTGCAGTGTCAGAAAAGAGTGGTAAATGTTAATGCTATGCCTTCAAGTCCTAATTCTGTTCTTAGGATGTATAGAATGGCACCTCATTCGCCTTATGATCCTCTTCATTTGGTACCTAAAATGGTTGATAAGCCTTGTGCTAAAGCGCTTGATTCTCGCGGTGCTTTTATTGTTCATGTTCCTTCTGCTATATATGTTTGGATTGGTAAAAATTGTAGTTCTGTCATGAGTTGTAATGCACGATCGGCAGCAACGCAGGTTGTTCGTTACGAGAAAGCAAATGCTCCAATTCTTTGCATCTGTGAAGATGAAGAGCCAGTGGATTTTTGGGTTGCTCTTTCCAACCAGCAATTATTGTTGGGGAGTTCTGATAAGGCAGAGGTGGTGGGGAAGGATTCTGATGAAAGAATGGAGATTGATGGTGACGGTGTTGTTGATATGGGGATTCATCCTAGGAAAGTTGATGAGTATGATTTGGATTTTGGGATTTTTCACAAAGCACTTGCTGGTGGTGTTGTTCCACCTTTTTCTGTATCTAATACAGGATCAGAAACCTTGCTTCCTGCTAGAGAAAATAGCTGGGGAAGACTAAGGAGGAAGCTTGCTAATGGTATCATGAAAGGTCTGTTTACATCTTCCAAATGTTGTGATACAACCTCGCCGAAAGATGAATTAAAGGTGAATGTGGAAGAAGAAAAACAACATCCTGTTGTTGATTCTTTACCACCTTCCTCAAAGCATCTTTCTGGTTCATCTGGTTACTTAGACTATATTATAGATAACAGCTCGGACAGGGCAAAAGATGGCCCTGTACTCGTGGATCGCCCTGTTCCTAGTGTTGGGTCGTCATTGCCACCAACTCCTCGTCGAAAATCAGATTCTTCTCCCTGTTCTTTAAGTAACAGCCCGAAATTCTGTTCCAAGTCGCCGACACTTTCTCCTTCCAATTCTGATTGTGATAGTTCCTTCACATTTTCGCCTGCATCTACACATTGGTCTGATTTGTCATTCATGTCCTCTCGGCCGCCATCACCCTCTTCTGGACTTGATTCAGCTGAACAACCTTTTTATGTTAAAGATGCATCTTTCTTAGAAAGATCCTCTTCACTTCGCAAAGATGCTGCTGTCTCGTCATCTTCAGAGACAATTTTGTTTAATAACACCATGGTAGGGAGAAAAGGGTCTAACTCTAAACCCTCCATTGCAGAGCGCAGAGGGAGTAAACCGCCGCCTCAAATGTTGGTATCTTCTGTTAGTGAATCATCCCGTGCTCACAAAGTCCTGGTAAGATCACAGACATTCACTTTGCCTGCCCGAGACGATAATTTGATGAAGTAG 2049 0.4256 MTESNDRAATSGYRSTFSRSVSWTDRSPSNRRPPTPSSAAVKNKQRSLLPPLRPLSINKRSIGEWPSAGSDDLGVWPETPRGRGSITGSEFQFTRDKLAFYDKECSRIAEHVYLGSDTVAKNHEVLRKNGITHVLNCVGFVCPEYFKSEFVYKTLWLQDSPTEDITSILYDVFDYFEDVRLQGGRVLVHCCQGVSRSTSLVIAYLMWREGQSFEDAFHYVKNARGVTNPNMGFACQLLQCQKRVVNVNAMPSSPNSVLRMYRMAPHSPYDPLHLVPKMVDKPCAKALDSRGAFIVHVPSAIYVWIGKNCSSVMSCNARSAATQVVRYEKANAPILCICEDEEPVDFWVALSNQQLLLGSSDKAEVVGKDSDERMEIDGDGVVDMGIHPRKVDEYDLDFGIFHKALAGGVVPPFSVSNTGSETLLPARENSWGRLRRKLANGIMKGLFTSSKCCDTTSPKDELKVNVEEEKQHPVVDSLPPSSKHLSGSSGYLDYIIDNSSDRAKDGPVLVDRPVPSVGSSLPPTPRRKSDSSPCSLSNSPKFCSKSPTLSPSNSDCDSSFTFSPASTHWSDLSFMSSRPPSPSSGLDSAEQPFYVKDASFLERSSSLRKDAAVSSSSETILFNNTMVGRKGSNSKPSIAERRGSKPPPQMLVSSVSESSRAHKVLVRSQTFTLPARDDNLMK 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04190 682 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 163 224 IPR000387 GO:0016311|GO:0016791
Mepo2g04190 682 CDD DSP 105 239 - -
Mepo2g04190 682 MobiDBLite consensus disorder prediction 502 549 - -
Mepo2g04190 682 ProSitePatterns Tyrosine specific protein phosphatases active site. 188 198 IPR016130 GO:0016311|GO:0016791
Mepo2g04190 682 PANTHER MKPA PROTEIN 10 663 - -
Mepo2g04190 682 MobiDBLite consensus disorder prediction 1 44 - -
Mepo2g04190 682 MobiDBLite consensus disorder prediction 626 659 - -
Mepo2g04190 682 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 95 246 IPR029021 -
Mepo2g04190 682 Gene3D Severin 259 355 IPR029006 -
Mepo2g04190 682 ProSiteProfiles Dual specificity protein phosphatase domain profile. 104 246 IPR020422 GO:0006470|GO:0008138
Mepo2g04190 682 Pfam Dual specificity phosphatase, catalytic domain 112 242 IPR000340 GO:0008138|GO:0016311
Mepo2g04190 682 SUPERFAMILY Actin depolymerizing proteins 253 356 - -
Mepo2g04190 682 SMART dsp_5 104 243 IPR020422 GO:0006470|GO:0008138
Mepo2g04190 682 MobiDBLite consensus disorder prediction 1 45 - -
Mepo2g04190 682 MobiDBLite consensus disorder prediction 522 549 - -
Mepo2g04190 682 SMART VILL_6 262 353 IPR007122 GO:0051015
Mepo2g04190 682 Gene3D Protein tyrosine phosphatase superfamily 87 245 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04190 Mepo-Chr2 50729686 50732098 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04190 28 140 Protein tyrosine phosphatase (PTP) family AT3G55270 44.697 7.58e-30 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04190 - - tpra:123917031 1056.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g04190 2 50729686 50732098 Mepo2g04190 2 50729686 50732098 ECH
Mepo2g04190 2 50729686 50732098 Mepo3g06286 3 76993223 76997241 PCT