Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04158 ATGGTCCTCAACTCTTCTTCCAATAAGGATTTCACACCCACAAATGAGGAACTTCTGCAACTATTCCTCTACAATAAAATTCATAACAAACCTTTGCCCAATCATATCACCATTCTTGAATACGATTTGTTCAGCACCACAATGAATCCATGGGAGATTTGTAAAGAGTTTGGAGCTTTCCACTCATATCGTGGAAAAGACCTATACTTTTCAACCTTAAAGAAGAAATCTGCAGCTAGCTCACACGTAGTTTGCACTATTGGAATTAGTAGATGGGAAGGTGAAGATGCTGGGAAAAATATATTCGCCAAAGACAAGAAGGAAACAACAACGATTAGGGTGATTGGCGAACAAAAGCTTGCAGTTTCGTTTAGAGAAATGAAAACGGGCCAATCCAAAGAGACAAAGTACAAGAAGATTGCAGCAAAACTAGGACAAAAGCATATGAGCAGAATGAAGGCTGCCTCTGTAGGCTTCGACTTTAGCCTTTGTTTTAGAACAGTGGGTTGGTTGGTTCCTTGGGCGTCTGATGCTCTTAGTAGTTTGCTGATGTGTGTTCTATTTGTTGTCTGCTAG 576 0.4028 MVLNSSSNKDFTPTNEELLQLFLYNKIHNKPLPNHITILEYDLFSTTMNPWEICKEFGAFHSYRGKDLYFSTLKKKSAASSHVVCTIGISRWEGEDAGKNIFAKDKKETTTIRVIGEQKLAVSFREMKTGQSKETKYKKIAAKLGQKHMSRMKAASVGFDFSLCFRTVGWLVPWASDALSSLLMCVLFVVC 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04158 191 Gene3D NAC domain 14 159 IPR036093 GO:0003677|GO:0006355
Mepo2g04158 191 SUPERFAMILY NAC domain 10 103 IPR036093 GO:0003677|GO:0006355
Mepo2g04158 191 Pfam No apical meristem (NAM) protein 10 129 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04158 Mepo-Chr2 50505403 50506725 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo2g04158 NAM 7.9e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04158 - - mtr:11433340 143.665