Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04152 ATGGTTATATATACTGTTGCCATGCCGCAGATATCATCCAGATGGGATCCAGTTGAAGCATGTCGGCCTATAATCGGTGAAACACCTGTGTTTTATCCAACGTTTGAGGAGTTTGAAGACACGCTTGGTTACCTAGCTAAGATACGTCCCTTAGCTGAACCGTATGGCATATGTAAAATTGTCCCTCCAGCATGCTGGGCTCCACCTTGCCCTCTTAAGGAGAAAGAGATATGGGAAAATGCTAAATTTCCGACCCGTATTCAGCAAGTTGATTTGCTTCAGAACCGAGAGCCGATGAGGAAGAAAAGTAGGGCAAGGAAACGAAAACGTGGAAAGCAGTCAAAGATGGGAACATGTAATAGGAGAACTGGAAATTCATGTTCTGAAGCTAATGCTACTTCTGAATCTGATGATAAGTTTGGATTCCAATCAGGGCCCGACTTCACACTTAAAGAATTTCAGCAATATGGAAATTCTTTTAAAGATTGCTACTTCGGGTTGAGTGATGCCAAAGATGGTAAAGGTAGTGATATTAATCACCACGAGAGACAGGAACCGTCTTTGGAGGATATTGAAGGTGAATACTGGCGAATAATTGAGAAACCTACTGATGAAGTCGAGGTGTATTATGGAGCTGACTTGGAAACTGGAGCACTTGGAAGTGGTTTTCCTAAGACATCATCCTTAACTAAGAGTGATTCAGATTTGTATGCTATGTCTGGCTGGAATTTGAATAACTTTGCGCGACTTCCAGGGTCTGCATTATGTTTTGAAGGAAGTGACATCTCAGGGGTTTTAGTTCCATGGCTGTATGTTGGAATGTGCTTTTCCTCATTTTGCTGGCATGTTGAAGATCATCACCTCTATTCACTTAATTATCTGCACTGGGGTGACCCAAAAGTATGGTATGGTGTACCTGGAAGCCATGCTTCAGCTATAGAAGATGCAATGAGGAAACATTTGCCTGATTTGTTTGAAGAGCAACCAAATCTACTCAACGAGTTGGTGACTCAGTTCTCTCCTTCAATACTTAAGTCCGAGGAGGTTCCTGTGTATCGCACTGTCCAGCATTCTGGGGAATTTGTTATCACGTTTCCAAGGGCATACCACTGTGGCTTCAGCAGTGGCTTCAATTGTGCAGAGGCTGTGAATGTGGCTCCATATGATTGGTTTATGCATGGTCAAAACGCTGCAGAGATTTACAGTCTACAGTGCCGTAAGACATCCTTGTCCCATGATAAGTTGTTATTTGGATCTGCTAAGGAAGCTGTACATGGCCTTTCAGAGACAACTCTTCATGGAAAAGAAAATCTAAAATGTTTAAATTGGAGAAATGCTTGTGGGAAAGATGGTGTTCTTACCAATGCAGTTAAGACAAGGATAATGATGGAGAAAGAGAGGCTTGAATGGCTTCCGAATCATTTAAAGATGCTGAAGATGGACAATGACTTCGATTCGGTTGAGGAAAGGGAATGTTACTATTGCTTCTATGACTTGCACCTCTCTGCTGTTGGTTGCGAGTGCTTTCCTGACAACTATTCTTGTCTTAGACATTTCAAGCTGTTTTGCTCATGTGAAATGGATAAAAGATTTGTTCTGGTTCGTTATACAATAGATGAGCTAAGCACATTGGTTGAAGCATTAGAAGGAGAACGACGTGCAATAGAAGCGTGGGAAACTAGAAACATTGGAGTTGTTTCTGCTAGTGTTGAGGATGCTTGCATGCACGAACAAGATATGGAGAGAGTCATGTGCAAAACTGAGAATTACAAAGAAGGGAAAAGATCGCCTTCTTGTACAGGAACTAATGAGAGGTTAAATTCAAATTTACCTAGCAGTCCTCACAGTCACATTTCTTCAGAGTTGGTCCATTCAGAGTCTCATCATGAAACTTCTCGTACACCTTATGTGGATCTGACTGGTGATATGGACAACCTGAATGATACTATGTTGGTCATGGACAATAAAGTTAAGGAGGATAAGGGAAGTTCTTTGTATTTGAATATTGGTGATATCTCTGATAAACCTGAAAATTCTTTGCTAAATATAGCCGAAATCCATCACAATAAGTGTGTTCCATATGCGGAAAAAGTTACTAGTGCAGAGACCAGAAAAGAACGAGACAACATAGAACTTAGTGCCGGTGGTATTTCTGTCTTGGAAAATGAACCTTCACCATGTCCAACTAATGTTCAAAATTCCGGTACACTTGATGGTTGTAAATTGTTTGGTGTCAATCTGCAAATGCACTCAGATCTAGGACAGAAACTCAATAGTACGTTTGAAACGGGAGTTCTAGACACCTCCAATACAAGTATATCTTTGACAAACCAAAGCTCCCCAATGAAAAAGTTTAGTATTTCGGTTGAGCTTGTTAGTTTGGGATCTGTTGTGTATGGAAAACATTGGTGCAGTAAGCATGCAATATATCCAAAAGGATTCAAGAGTCGTGTAAAGTTCTTTAGCATTCTTGATCCAGCAAGCATCTGTAACTATGTTTGTGAAGTCATTCCTGCTGGATTTCTTGGCCCTTTTTTCAGGGTTACTTTGGAAGAACACCCCAACGAGGTTTTCACAAACACCTCAGCAGATACGTGCTGGGAATCTGTTATTGATATACTAAACTATGAAATAAATAAGCGCAAGAGTCTCGGTGAACTAGACATGCCTCCCTTGGAGCTACTGCACAACATCAATGGTCATAAAATGTTCGGATTCCTTTCGCCATCCATTATTCAGTCCATTGAAGCTCAAGATCCCAGTCATGAATGTGTAGAGTACTGGAATCACAAACAAGTTAATTCTGGATCTTCAGGCAAATCCATTGATGACTCTAAGTTAACTTGTGGTTCAAGTAATAGCTGTCTAGGTGACTCGAGGACCAAACTTTTTGGTGTCAATTTGATAAAGCTGGAGGAGGATGACATAGGAGAAAGTTCTCATTCGTTTGAAGAGATGAAGTTGATTCTAGAAAGATTCCTGAAAAAGGGAAGTCCTGACGAGTTACGAGCAATGCGTCAGTTATTCAGTTCTGATGCACAATTGACTCAGTGGAGACCTGCGCTGAAAGTTCTGATAGAGAAAATCAAGAAAGATTGTGAATAA 3105 0.4084 MVIYTVAMPQISSRWDPVEACRPIIGETPVFYPTFEEFEDTLGYLAKIRPLAEPYGICKIVPPACWAPPCPLKEKEIWENAKFPTRIQQVDLLQNREPMRKKSRARKRKRGKQSKMGTCNRRTGNSCSEANATSESDDKFGFQSGPDFTLKEFQQYGNSFKDCYFGLSDAKDGKGSDINHHERQEPSLEDIEGEYWRIIEKPTDEVEVYYGADLETGALGSGFPKTSSLTKSDSDLYAMSGWNLNNFARLPGSALCFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKVWYGVPGSHASAIEDAMRKHLPDLFEEQPNLLNELVTQFSPSILKSEEVPVYRTVQHSGEFVITFPRAYHCGFSSGFNCAEAVNVAPYDWFMHGQNAAEIYSLQCRKTSLSHDKLLFGSAKEAVHGLSETTLHGKENLKCLNWRNACGKDGVLTNAVKTRIMMEKERLEWLPNHLKMLKMDNDFDSVEERECYYCFYDLHLSAVGCECFPDNYSCLRHFKLFCSCEMDKRFVLVRYTIDELSTLVEALEGERRAIEAWETRNIGVVSASVEDACMHEQDMERVMCKTENYKEGKRSPSCTGTNERLNSNLPSSPHSHISSELVHSESHHETSRTPYVDLTGDMDNLNDTMLVMDNKVKEDKGSSLYLNIGDISDKPENSLLNIAEIHHNKCVPYAEKVTSAETRKERDNIELSAGGISVLENEPSPCPTNVQNSGTLDGCKLFGVNLQMHSDLGQKLNSTFETGVLDTSNTSISLTNQSSPMKKFSISVELVSLGSVVYGKHWCSKHAIYPKGFKSRVKFFSILDPASICNYVCEVIPAGFLGPFFRVTLEEHPNEVFTNTSADTCWESVIDILNYEINKRKSLGELDMPPLELLHNINGHKMFGFLSPSIIQSIEAQDPSHECVEYWNHKQVNSGSSGKSIDDSKLTCGSSNSCLGDSRTKLFGVNLIKLEEDDIGESSHSFEEMKLILERFLKKGSPDELRAMRQLFSSDAQLTQWRPALKVLIEKIKKDCE 1034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04152 1034 Pfam JmjC domain, hydroxylase 269 385 IPR003347 -
Mepo2g04152 1034 Gene3D - 786 925 - -
Mepo2g04152 1034 FunFam Putative lysine-specific demethylase JMJ16 787 925 - -
Mepo2g04152 1034 SMART JmjN_1 27 68 IPR003349 -
Mepo2g04152 1034 PANTHER LYSINE-SPECIFIC DEMETHYLASE 25 748 - -
Mepo2g04152 1034 ProSiteProfiles JmjN domain profile. 28 69 IPR003349 -
Mepo2g04152 1034 SMART fyrn_3 795 839 IPR003888 GO:0005634
Mepo2g04152 1034 ProSiteProfiles FYR domain FYRC motif profile. 841 931 IPR003889 GO:0005634
Mepo2g04152 1034 MobiDBLite consensus disorder prediction 95 139 - -
Mepo2g04152 1034 Pfam jmjN domain 29 62 IPR003349 -
Mepo2g04152 1034 ProSiteProfiles JmjC domain profile. 239 402 IPR003347 -
Mepo2g04152 1034 SUPERFAMILY Clavaminate synthase-like 232 420 - -
Mepo2g04152 1034 SMART fyrc_3 845 938 IPR003889 GO:0005634
Mepo2g04152 1034 MobiDBLite consensus disorder prediction 589 639 - -
Mepo2g04152 1034 MobiDBLite consensus disorder prediction 594 620 - -
Mepo2g04152 1034 MobiDBLite consensus disorder prediction 117 139 - -
Mepo2g04152 1034 Gene3D Cupin 13 386 - -
Mepo2g04152 1034 Pfam C5HC2 zinc finger 492 544 IPR004198 -
Mepo2g04152 1034 SMART cupin_9 239 402 IPR003347 -
Mepo2g04152 1034 MobiDBLite consensus disorder prediction 100 116 - -
Mepo2g04152 1034 Pfam F/Y-rich N-terminus 788 836 IPR003888 GO:0005634
Mepo2g04152 1034 ProSiteProfiles FYR domain FYRN motif profile. 781 839 IPR003888 GO:0005634
Mepo2g04152 1034 Pfam F/Y rich C-terminus 843 930 IPR003889 GO:0005634
Mepo2g04152 1034 MobiDBLite consensus disorder prediction 621 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04152 Mepo-Chr2 50467971 50472522 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04152 752 969 JUMONJI Transcription Factor Family AT1G30810 45.413 4.80e-49 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mepo2g04152 JmjC 2.7e-44 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04152 K11446 - gmx:100814590 1508.04