Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04128 ATGGTTACAAATTCAATCTCAGCAGCACCCTCTCCTTCTGCCAAAAATTCTTCATGTCCAGTTGACATGAATTATGTGTTAAGAGTTCCTTGGAACACCTCCACATGCCTTAACTTCCAACCCTTGAAATCCCAAAACAAAGCACAAACAACTCTATGTTGTCAAACTTTGTTGTCCCTTTTTGGCCTAGCACTAGCAAAAAATCTCAACAAGAACTCTCTTTTCCAACTCCCAAACCTCCCTACCTCCACATCATGCCTTCAAGACTTCCAAACTAAGCTCAGTTCCCTTTCACTTAACAATGACCTTGTGTCTTCATGCTTTGATCCACTTCAATTTGTTATCACTCCCAACATATGTGCTCGTATTCAATCTAAGCAAGATTGGATCAGCAGGGTTGGTCCTGCACCATTGTTCAACACTTCTTGTAAACCAGACCTTAGTGTTTCTACCAATTGCGATGCATGTGTTAACCAGGGACTAAAGGTTCAAGAGACACTGAATCAAATTGATGGTAATAGTTCACATTCCAAAAATTGCTTTTACTTCACCATCATTTATATTGTTGGAGTTGTGAATGAGTTTGGCCCTGAAAGCAACGGTGCTATGTCATGCATTCTTGAATTGCCTCTTAATTCTCAAGTCGGTTCCAGCAAAAAGAGCTATCATGCTCTTGTTTTTGGGTTAATTGGAGTTTCAGTCGGATTCACCGTTATCATGTTCTCTTTGTTTGCCTACTATTTTTGGCACACTAGGAGGATAAAGAGAATAAGTACTGAAAATTTTCTAGACCTTGCCGATCCAAGTGAACAAAGGTCCGGCCCAAGATTGAGACCAAAAATAGGATCAATTTGGTTCAAATTTGATGACCTTGTAAAGGCGACTGACAATTTCTCACTCCAAAACTATATTGGTAGAGGTGGATTTGGGATAGTTTACAAGGGCATTCTACCTGATAACACAACTGTTGCTGTTAAATGCATGGAAGAATCTGATTTTCTAGGGGATGATGAGTTCTATAACGAAGTGGAGATTATTGGCAACTTGAAGCACCGCAATCTAGTGCCACTAAGAGGGTGTTGTGTGGTTAATGAGGATCATAATCAAGAGCACAAAAATAGGTATCTTGTTTATGATTACATGCCAAATGATTGGGTTTGGTCGTTAATGAAATCAGGAAACCTAGCAGAAGCTTTGGATGCTTCTATATTGGTGGATGATGGAAAATCCAATAGTAGAAATATAATGGAGAGGTTTTTGCTGGTTGGAATTCTGTCTTCTCATGTAATAGCTGATTCAAGGCCAACAATTTTGGATGCTTTGAAGATGTTAGAAGGAGATATTGAGGTTCCGTCAATTCCAGAGAGGCCAATGACTCTTGAGCACCACATGTATACAAATGGTGATTCTGTAAAACAGTGA 1422 0.3945 MVTNSISAAPSPSAKNSSCPVDMNYVLRVPWNTSTCLNFQPLKSQNKAQTTLCCQTLLSLFGLALAKNLNKNSLFQLPNLPTSTSCLQDFQTKLSSLSLNNDLVSSCFDPLQFVITPNICARIQSKQDWISRVGPAPLFNTSCKPDLSVSTNCDACVNQGLKVQETLNQIDGNSSHSKNCFYFTIIYIVGVVNEFGPESNGAMSCILELPLNSQVGSSKKSYHALVFGLIGVSVGFTVIMFSLFAYYFWHTRRIKRISTENFLDLADPSEQRSGPRLRPKIGSIWFKFDDLVKATDNFSLQNYIGRGGFGIVYKGILPDNTTVAVKCMEESDFLGDDEFYNEVEIIGNLKHRNLVPLRGCCVVNEDHNQEHKNRYLVYDYMPNDWVWSLMKSGNLAEALDASILVDDGKSNSRNIMERFLLVGILSSHVIADSRPTILDALKMLEGDIEVPSIPERPMTLEHHMYTNGDSVKQ 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04128 473 Gene3D Phosphorylase Kinase; domain 1 270 380 - -
Mepo2g04128 473 SUPERFAMILY Protein kinase-like (PK-like) 277 400 IPR011009 -
Mepo2g04128 473 ProSiteProfiles Protein kinase domain profile. 298 473 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g04128 473 Pfam Protein kinase domain 300 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g04128 473 FunFam Receptor-like serine/threonine-protein kinase At4g25390 265 380 - -
Mepo2g04128 473 ProSitePatterns Protein kinases ATP-binding region signature. 304 326 IPR017441 GO:0005524
Mepo2g04128 473 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 384 460 - -
Mepo2g04128 473 Pfam SPARK 14 181 IPR043891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04128 Mepo-Chr2 50216690 50218531 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04128 380 465 Receptor kinase-like Gene Family AT1G11050 59.091 7.10e-26 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Mepo2g04128 SPARK 9.2e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04128 - - lja:Lj4g3v2693570.1 501.516