Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04127 ATGAAATCTAGTTTGGTTCTTTTCCTTGTTTTTCTCATCACAGTTACAACAGATGCATCAAACTCAACATGTCCAGTGTCCATGAAATTTGTCTCAACAGTTCCTTGGAACAAATCTCTTTGTCATAACTTCAAACCTTTAACATCCAAAACAGAAACACAAGAAACTCTTTGTTGTAAAACTCTCTTATCTCTCTTTGGTATAGCACTTGCTGAAAATCTATACAAAAACTCCCTTTTCAATTTTCACAACATAACTACCTCAACTTCTTGTCTACATAATTACCAATCTAGCCTCACTTCAATTTCACTTCCCAACAACCTTGTCTCTTCATGCTTTGATCCATCTCAATTTGTTGCCACACCTGACACATGTGCTCAAATTCAAACCAAACAAGATTGGCTTAACAAAGTTGATTCAACAGATTTAACTGTTCTTGATAATGTTTGTGAACCAGATTTAACAGATTCAGATCATTGTGATGCTTGTACTAAACAAGGGTTTAAGGTTCAACAGATGCTGACTAAACTTGATGGTAATAGTTCACATTCTCAAGATTGTTTTTATTTTACAATACTATATATTGCTGGAATTGTGAATAAACTTGGTCCTGAGAGTAAAGGTGTTTTGGCTTGCATTCTTATTTTGTTGGTTCCACATGAGGATTCTGAAAAGGAACATCATCATCATGCTCTTGTTATTGGATTGGTTGTAGCTTCATTTGTATTTTTATTATTTTTGTTAGGGTTATTGTATTTTTGGTATATTTGGTGGGTGAAGAAAAGAAACAATGAAAATTTGTTATTACATAATGGTGGTTCACAAGAGCCTAGTTTTAGTTTAAGAGTTAGGCCTAAAAGTGGGTTGATTTGGTTTGAGTTTAAGGATCTTGTGAAGGTTACTGACAACTTTTCGGCCCAAAATTTCATTGGAAGAGGCGGGTCTGGTTCGGTTTACAAGGGGGTTTTACCGGATGGGACGATTGTTGCGGTTAAAAGGATTGAAGAGTCTGATTATCAAGGAGATGTTGAGTTTTACAGAGAGGTGGGGATTGTTAGTAGCTTGAAGCATCGCAATTTGGTGCCGCTGAGAGGATGTTGTGTTGTTGGTGGAGATGAGAATCCCGAGTACATTGGAAAGTATTTTGTTTATGATTATATGCCGAATGGTAGTCTTAAAGACCATCTTTTCCCTGAAATGGATAACCAAAATGCAAAACAATCTTTGACTTGGTCTCAAAGAAAAAACATAATCTTGGATGTGGCGAATGCATTGGTTTATTTGCACTTTGGAGTTAAGCCTCCTGTTTATCACAGAGATATCAAAGCTACCAATATACTACTTGATGCAGGTATGAGAGCAAGGGTTGCAGATTTCGGACTGGCGAAACAGGACTACAGTCAAAATATGTCTCAGCCAAATACTAGAGTAGCCGGAACTCGCGGATATCTAGCTCCAGAATATGCACTTTATGGTCAGTTAACCGAGAAGAGTGATGTCTATAGTTTTGGCGTGGTTGTTCTTGAGGTAATGTGTGGAAAAAAGGCTCTTCAGTTGTCTTCGTCTGGAGAGCCTAATTTCTTGATCACGGATTGGGTTTGGTCGTTGATGAAATCTGGAAACACGACGAAGGCTTTGGATGCTTCTATGTTATTGGATGGAAATTCCACTAGAAGCACAATGGAGAGATTTTTGATGGTTGGAATTTTGTGCTGTCATGTAGTGGTTGCTTTAAGGCCCACAATTTTGGATGCTTTGAAGATGCTAGAAGGAGACATTGAGGTTCCATCAATTCCAGATAGGCCAATAACTGTAGGGAATCGCATGTTCGCCAACGGTGATTCAACTTTATAG 1854 0.3786 MKSSLVLFLVFLITVTTDASNSTCPVSMKFVSTVPWNKSLCHNFKPLTSKTETQETLCCKTLLSLFGIALAENLYKNSLFNFHNITTSTSCLHNYQSSLTSISLPNNLVSSCFDPSQFVATPDTCAQIQTKQDWLNKVDSTDLTVLDNVCEPDLTDSDHCDACTKQGFKVQQMLTKLDGNSSHSQDCFYFTILYIAGIVNKLGPESKGVLACILILLVPHEDSEKEHHHHALVIGLVVASFVFLLFLLGLLYFWYIWWVKKRNNENLLLHNGGSQEPSFSLRVRPKSGLIWFEFKDLVKVTDNFSAQNFIGRGGSGSVYKGVLPDGTIVAVKRIEESDYQGDVEFYREVGIVSSLKHRNLVPLRGCCVVGGDENPEYIGKYFVYDYMPNGSLKDHLFPEMDNQNAKQSLTWSQRKNIILDVANALVYLHFGVKPPVYHRDIKATNILLDAGMRARVADFGLAKQDYSQNMSQPNTRVAGTRGYLAPEYALYGQLTEKSDVYSFGVVVLEVMCGKKALQLSSSGEPNFLITDWVWSLMKSGNTTKALDASMLLDGNSTRSTMERFLMVGILCCHVVVALRPTILDALKMLEGDIEVPSIPDRPITVGNRMFANGDSTL 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04127 617 ProSiteProfiles Protein kinase domain profile. 304 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g04127 617 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 72 602 - -
Mepo2g04127 617 ProSitePatterns Protein kinases ATP-binding region signature. 310 332 IPR017441 GO:0005524
Mepo2g04127 617 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 387 597 - -
Mepo2g04127 617 ProSitePatterns Serine/Threonine protein kinases active-site signature. 436 448 IPR008271 GO:0004672|GO:0006468
Mepo2g04127 617 SUPERFAMILY Protein kinase-like (PK-like) 281 590 IPR011009 -
Mepo2g04127 617 SMART serkin_6 304 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g04127 617 FunFam Receptor-like serine/threonine-protein kinase At4g25390 269 386 - -
Mepo2g04127 617 Pfam Protein kinase domain 307 534 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g04127 617 CDD STKc_IRAK 310 591 - -
Mepo2g04127 617 Pfam SPARK 19 188 IPR043891 -
Mepo2g04127 617 Gene3D Phosphorylase Kinase; domain 1 274 386 - -
Mepo2g04127 617 Gene3D Transferase(Phosphotransferase) domain 1 387 596 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04127 Mepo-Chr2 50200099 50202729 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04127 19 613 Receptor kinase-like Gene Family AT1G11050 54.139 0.0 617
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Mepo2g04127 Pkinase 8.5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04127 - - gmx:100788367 771.541