Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04121 ATGGATCAAGGTCAAGGTGGTGGTAATGAGTATCCAGTTTTCTTACATGGTGACTTAGATCTATTTATCATAGAAGCAAAATCTCTTCCAAATCTAGATTTATCAACTGAAGCAGTTAGAAAATGTGTAACTATGGGAAACAGTTGCACACCACCTTTTGTAAAAGGACTCAAAACACACTCAGGAAAAGACAAGATCATAACAAGTGACCCTTATGTATCTATTTGTCTAGCTGGTGCAACCATAGCACAAACAAGAGTCATTCCGAATTGCGAAAACCCTTTATGGGATGAACATTTTCTTGTTCCTGTTGCTCATCCTGCTCACAAAATTGAATTTCTAGTAAAAGATAATGATATCCTTGGTGCTGAACTCATTGGAGTTGTGGAAATACCTGTTCAAAAGATACTCTCTGGAAACATTCTTAATGATTGGTTTCCAATTATTGGTCAACATGGAAACTGCTTGAAACCTTATCCTGAACTGCATATTTCAATTCAGTATATGTCTATTGATGTTAATGAAGATAATGGAAGTGTTAATTATGGCGTTCCTGGTACATATTTTCCGCTTAGAAGAGGAGGGAATGTCACTCTTTATCAAGATGCACATGTACCGGATGGTATGCTACCTGAGATCGAACTCGAAGGTGGAAAAATGTTTCAACATAGTAAATGTTGGGAGGACATTTGTCATGCAATTTTGGAAGCTCATCATATGATATATATTATTGGATGGTCGGTTTTTCACCCTGTGAAGCTTGTTCGAGAGCCAACAAAACCATTGCCGTCTGGTGGAGAGCTTTCACTTGGAGAACTTTTGAAATATAAGTCACAAGAAGGGTTAAGAGTCGTTATGTTGATTTGGGATGACAGGACTTCACATGACAAGTTTCTTTTGAAAACAGAAGGTGTGATGCAGACTCATGATGAAGAAACTAAAAAGTTTTTTAAACATTCAACAGTTCATTGTATATTATCTCCGCGTTATGCAAGCAATAAACTCATACCAATTCTGTTGGATCTTTTGGACCAGGTTGTGGGAACACTCTTTACACATCACCAGAAATGTGTGCTTGTAGACACACAAGGTTCTGGGAATAATCGGAAAATAACCGCTTTTATTGGTGGTCTTGACCTGTGTGATGGCAGATATGATACTCCTGAGCATAGGCTTTTTAGTGATCTTGATACAGTCTTTCAAAATGATTTCCATAATCCTACATTTCAATTAAATTCTAACTCTTCTGCACCAAGGCAACCATGGCATGACTTACATTGCAAAATTGAAGGTCCAGCTGCATATGATATATTGACCAACTTTGAACAAAGATCAAGGAAGGCCAAAAAATGGCGTGACTTCAGGCTCAGAAAAGTAACAAACTGGCATGATGATGCTTTACTAAGGCTAGATCGTATTTCATGGATTGTCAAACCATCTTCTGGTCCTGATGGTGATAAATCTGTTCGTGTAACCGAAGAAACTGATCCTGAGAGTTGGCATGTGCAGGTATTTCGGTCCATAGATTCAGGATCTGTGAAGGGATTTCCAAAGGATGTTGACAAAGCAAAGGCTCAGAATCTTTTATGTGGAAAAAACTTAAAAGTTGACCAAAGCATCCATGCTGCTTATGTAAAAGCAATAAGATCGGCTCAGCGCTTCGTTTATATTGAGAATCAGTATTTTCTTGGCTCCTCGTATCATTGGCCTACATATAGAAATGCAGGTGCAAATCACTTGATTCCAATGGAGTTGGCATTAAAAATTGCAAGCAAGATAAGCGCACATGAACGATTTTCTGTGTATATAGTCATACCAATGTGGCCAGAAGGAGTTCCAACTAGTGCTGCTGTTCAAGAAATCTTGTTCTGGCAGGGACAAACAATGTCTATGATGTATAAGATTGTTGCAGATGCACTTGTAAAAGCAGGTCTCTCTGAATGTTATCATCCACAAGATTATCTCAATTTTTACTGCCTTGGAAAGAGAGAACCTCATTCACGTGAAAGTCTATCAACACAAAATCAATCATCTGAAAATCGCGCCTTGGTATCAGTTAAAAAGTACAGGCGTTTTATGATTTATGTTCATGCTAAAGGAATGATAGTTGATGATGGATATGTAATAATTGGATCAGCGAATATTAATCAGAGATCAATGGATGGATCAAGGGACACAGAACTAGCTATGGGGGCTTATCAACCAAAACATACATTGGCAGAAAAGAACTCTCTTCCACGTGGCCAGGTGTATGGATACCGAATGTCACTTTGGGCTGAGCACCTTGGTGGTATCGATGACACTTTTACGGAACCTCACACCTTGGAATGTGTTAGATGTGTCAATAGAATTGCTAGAAAAAATTGGAGCATATATGTGTCTGAGGAAAGTCTTCAAATGAAGGGAAATTTGATGCATTATCCAGTTCAAGTTAGCAGAAATGGAAAAGTCAGTACACAAAATGGTCAAGAGTATTTTCCTGATGTTGGTGGCAAAATTCTTGGATCACAAAATTCACTTCCGGATGCACTAACTACATGA 2541 0.3833 MDQGQGGGNEYPVFLHGDLDLFIIEAKSLPNLDLSTEAVRKCVTMGNSCTPPFVKGLKTHSGKDKIITSDPYVSICLAGATIAQTRVIPNCENPLWDEHFLVPVAHPAHKIEFLVKDNDILGAELIGVVEIPVQKILSGNILNDWFPIIGQHGNCLKPYPELHISIQYMSIDVNEDNGSVNYGVPGTYFPLRRGGNVTLYQDAHVPDGMLPEIELEGGKMFQHSKCWEDICHAILEAHHMIYIIGWSVFHPVKLVREPTKPLPSGGELSLGELLKYKSQEGLRVVMLIWDDRTSHDKFLLKTEGVMQTHDEETKKFFKHSTVHCILSPRYASNKLIPILLDLLDQVVGTLFTHHQKCVLVDTQGSGNNRKITAFIGGLDLCDGRYDTPEHRLFSDLDTVFQNDFHNPTFQLNSNSSAPRQPWHDLHCKIEGPAAYDILTNFEQRSRKAKKWRDFRLRKVTNWHDDALLRLDRISWIVKPSSGPDGDKSVRVTEETDPESWHVQVFRSIDSGSVKGFPKDVDKAKAQNLLCGKNLKVDQSIHAAYVKAIRSAQRFVYIENQYFLGSSYHWPTYRNAGANHLIPMELALKIASKISAHERFSVYIVIPMWPEGVPTSAAVQEILFWQGQTMSMMYKIVADALVKAGLSECYHPQDYLNFYCLGKREPHSRESLSTQNQSSENRALVSVKKYRRFMIYVHAKGMIVDDGYVIIGSANINQRSMDGSRDTELAMGAYQPKHTLAEKNSLPRGQVYGYRMSLWAEHLGGIDDTFTEPHTLECVRCVNRIARKNWSIYVSEESLQMKGNLMHYPVQVSRNGKVSTQNGQEYFPDVGGKILGSQNSLPDALTT 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04121 846 Gene3D C2 domain 13 169 IPR035892 -
Mepo2g04121 846 Gene3D Endonuclease Chain A 216 466 - -
Mepo2g04121 846 SMART pld_4 349 384 IPR001736 GO:0003824
Mepo2g04121 846 SMART pld_4 692 719 IPR001736 GO:0003824
Mepo2g04121 846 FunFam Phospholipase D delta 217 466 - -
Mepo2g04121 846 Pfam Phospholipase D C terminal 766 836 IPR024632 -
Mepo2g04121 846 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 14 170 IPR035892 -
Mepo2g04121 846 PIRSF PLD_plant 5 846 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Mepo2g04121 846 PANTHER PHOSPHOLIPASE D 13 836 IPR015679 -
Mepo2g04121 846 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 692 719 IPR001736 GO:0003824
Mepo2g04121 846 Pfam C2 domain 17 148 IPR000008 -
Mepo2g04121 846 Pfam Phospholipase D Active site motif 350 384 IPR001736 GO:0003824
Mepo2g04121 846 SMART C2_3c 18 145 IPR000008 -
Mepo2g04121 846 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 349 384 IPR001736 GO:0003824
Mepo2g04121 846 SUPERFAMILY Phospholipase D/nuclease 538 769 - -
Mepo2g04121 846 SUPERFAMILY Phospholipase D/nuclease 188 453 - -
Mepo2g04121 846 CDD C2_plant_PLD 12 169 - -
Mepo2g04121 846 Gene3D Endonuclease Chain A 505 743 - -
Mepo2g04121 846 ProSiteProfiles C2 domain profile. 1 146 IPR000008 -
Mepo2g04121 846 Pfam PLD-like domain 680 728 IPR025202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04121 Mepo-Chr2 50135689 50139413 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04121 6 845 Phospholipase D Gene Family (Wang group) AT2G42010 53.089 0.0 910
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04121 K01115 - gmx:100779740 1450.26