LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo2g04118	ATGGCGAATTCAAAGAGCTCATCGGGTGTCAGAAATTTGATGTATCCTGGAAGGCATGCACATGCTCTGCTTCCTCCCAAAAGCCCATTTCCTAGTATCTCCCAAGCATATTCTGATTATGTCTCTAACCCTACAGTTGGTCCAAAGCCGGTTAATAAGCCACGAGAAGGAAACGCACACCACCAACGTACTTCATCTGAGAGCCATCTTATCGAGGAGCAGCCGTCGTGGCTTGATGATCTCCTAAATGAGCCAGATACACCTGTCAGAAGGGGTGGTCATAGGCGTTCATCAAGTGATTCTTTTGCATATATTGACAATATTAATGCGTCTAACATCAATTATGCGGATCATGATGAGTATAAATATAAGAATTTGTCTATTCCGGCTTGGTCACCTCCAGACTTTGACCGCAACAAAGATGCTCGTCATGTACCTACGTATGCAGAAATCAATGCAGCAAAACAGAGGAATAGGTCATGGGACTCTTTTTCAAATATGAGTGGTGTTCCATCTAGCAAAGACAATGTTGCTTTTCAGAGATCGGGATCACCGACCCCATGTACACTATACGAACCAGATCGGATCCTACTGACTGCAAATGAAAATCACGATTCATTAGAAGCTGGCGTACAAGACATAAAATCACCTTTTGAAAGAAAGGATGGCTTACATGCAAAGTCATCTGCTTCTGAAACAGATTCAAAACGTGCTAAACAGCAATTTGCTCAACGGTCACGGGTCCGTAAACTTCAGTACATAGCTGAGCTGGAAAGAAATGTACAGGCTTTACAGGCAGAAGGGTCTGAAGTATCGGCTGAGCTTGAGTTTCTTAACCAGCAGAATCTTATCCTGAGTATGGAGAATAAAGCACTCAAACAACGTTTAGAAAGTTTAGCACAGGAGCAGCTTATCAAATATCTGGAGCAGGAAGTACTGGAGAGAGAGATTGGAAGATTACGTGGCATGTACCAACAGCATCTGCAGCAGGCACAGCAGCCTCAACAACAACCATCTGGCAGCCATAGACGCACAAACAGCAGAGACCTTGACTCTCAGTTTGCTAACCTTTCTCTGAAGCATAAGGACACAAATTCGGGGCATGACCCTGCGAACGGAGCACTCAGAATTTAG	1134	0.4418	MANSKSSSGVRNLMYPGRHAHALLPPKSPFPSISQAYSDYVSNPTVGPKPVNKPREGNAHHQRTSSESHLIEEQPSWLDDLLNEPDTPVRRGGHRRSSSDSFAYIDNINASNINYADHDEYKYKNLSIPAWSPPDFDRNKDARHVPTYAEINAAKQRNRSWDSFSNMSGVPSSKDNVAFQRSGSPTPCTLYEPDRILLTANENHDSLEAGVQDIKSPFERKDGLHAKSSASETDSKRAKQQFAQRSRVRKLQYIAELERNVQALQAEGSEVSAELEFLNQQNLILSMENKALKQRLESLAQEQLIKYLEQEVLEREIGRLRGMYQQHLQQAQQPQQQPSGSHRRTNSRDLDSQFANLSLKHKDTNSGHDPANGALRI	377

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Mepo2g04118	377	PANTHER	BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED	10	359	IPR044797	-
Mepo2g04118	377	Coils	Coil	247	302	-	-
Mepo2g04118	377	Gene3D	-	235	288	-	-
Mepo2g04118	377	SMART	brlzneu	232	291	IPR004827	GO:0003700\|GO:0006355
Mepo2g04118	377	MobiDBLite	consensus disorder prediction	54	68	-	-
Mepo2g04118	377	SUPERFAMILY	Leucine zipper domain	243	285	IPR046347	GO:0003700\|GO:0006355
Mepo2g04118	377	MobiDBLite	consensus disorder prediction	33	75	-	-
Mepo2g04118	377	MobiDBLite	consensus disorder prediction	326	343	-	-
Mepo2g04118	377	CDD	bZIP_plant_RF2	236	282	IPR044759	GO:0003700\|GO:0006355
Mepo2g04118	377	MobiDBLite	consensus disorder prediction	218	243	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo2g04118	Mepo-Chr2	50095144	50099760	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo2g04118	238	306	bZIP Transcription Factor Family	AT2G42380	57.971	6.98e-18	80.9

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo2g04118	-		-	cam:101495568	665.996

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mepo2g04118	2	50095144	50099760	Mepo2g04118	2	50095144	50099760	ECH

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