Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04115 ATGAATAGAAACTTCGTTTTTGTTTCAGCAATCTTTGTTTGTCTCATAGTGGTTGCCTTCGGTGATCATAATGAGAAGATTAGCACTGAGGAAGCCTCTCCGCACCTTCTTGAGGTGGATTATGGGAGACATCCAACTTGGTTTTCTTTTCCTAATCGTAAGCTATTGTCAAAGTTAAATACCAGAATTAAACCTAATTCAACAGTGGCTAAGGACGGTAGTGGCGAATTTACTACCGTTACTGATGCCATTAACTCATACTCGTCGAAGAAAAATCGACATAGATTCATCATCTATGTCAAGGCCGGTACCTACAATGAGCACATTACAATCGACAAGGACAAGACTAACATTCTCTTGTATGGTGACGGCCCTACTAAAACAATTATCACCGGAAGCAGGAGTCTTAACGAAGGAGTGAATAAAACAATGAACACAGCCACCTTCACCACCCTTGCTAACGATTTTATTGCTAAGTCAATTACTTTCGAAAACACTGCGGGTCATGAAGCTGGGCCATCTGTTGCACTTCAAGTGGAAGGTGATCGTTCAGCATTCTTTGATTGTGGAATTTATGGTTACCAAGACACTTTGTATGCGCACAAACTCCGCCAGTTCTACCGCAATTGTGAGATCTCTGGAACCATAGATTTCATCTTTGGGCATTCTACTACCTTGATCCAAAACTCCAAAATAATTGTGAGGAAGCCGGGTCCAGGCCATAGCAACGTTGTGGTGGCAGACGGAACAAAACAAAAGAATGCACTCACTGGAATAGTCCTTCAAAATTGCTCTATCATGCCAGATGTTGAGCTTTTACCTGATAGGTTGAAGGTGAAGACTTATTTGGCAAGACCATGGAAGCCATTTTCAAGGGCAATATTTATTAATAATGTTATGGGTGATTTTATTCAACCAGATGGGTATTCAGTTTGGGCTCCTAATGAAACACAAACTGCACACTGTTACTTTGCTGAGTTTGGTAACACTGGACCTGGTGCTAATACTCAAGCTAGGGCAAAATGGAGTAAAGGTGTTATTAGTAAGGATGAGGCTGCTAAATTCACTGCTGAAAATTGGCTTCAAGCTAGCACTTGGTTGCTTGCCACTGACATTCCTTTCAGTCCTGGATTTGAGTCTTGA 1143 0.4147 MNRNFVFVSAIFVCLIVVAFGDHNEKISTEEASPHLLEVDYGRHPTWFSFPNRKLLSKLNTRIKPNSTVAKDGSGEFTTVTDAINSYSSKKNRHRFIIYVKAGTYNEHITIDKDKTNILLYGDGPTKTIITGSRSLNEGVNKTMNTATFTTLANDFIAKSITFENTAGHEAGPSVALQVEGDRSAFFDCGIYGYQDTLYAHKLRQFYRNCEISGTIDFIFGHSTTLIQNSKIIVRKPGPGHSNVVVADGTKQKNALTGIVLQNCSIMPDVELLPDRLKVKTYLARPWKPFSRAIFINNVMGDFIQPDGYSVWAPNETQTAHCYFAEFGNTGPGANTQARAKWSKGVISKDEAAKFTAENWLQASTWLLATDIPFSPGFES 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04115 380 PANTHER PECTINESTERASE 39 367 - -
Mepo2g04115 380 FunFam Pectinesterase 4 63 378 - -
Mepo2g04115 380 ProSitePatterns Pectinesterase signature 2. 212 221 IPR033131 -
Mepo2g04115 380 SUPERFAMILY Pectin lyase-like 63 377 IPR011050 -
Mepo2g04115 380 ProSitePatterns Pectinesterase signature 1. 92 111 IPR018040 -
Mepo2g04115 380 Gene3D - 60 378 IPR012334 -
Mepo2g04115 380 Pfam Pectinesterase 67 363 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04115 Mepo-Chr2 50070190 50072092 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04115 35 378 Carbohydrate Esterase AT2G47030 43.855 3.70e-96 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04115 K01051 - gmx:100808559 474.937