Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04112 ATGGAAAACATTGCCGCGCAACTAAAGCGCGGCATCTCGCGCCAATTCTCCTCCGGCTCCTTACGCAAAACTCTCAGCCGTCAATTCACACGTCAAGCATCTCTCGATCCACGTCGGAACAATCTCCGTTTCAGCTTCGGTCGTCAATCATCGCTAGACCCGATCCGACGTAGTCCCGGCGATGATGAAGACCAGGCTGAACTCACCGTACCGGAGAATCTCGATTCCACCATGCAGCTTTTGTTCATGGCGTGTCGTGGTGATGTTAAAGGAGTTGAAGATTTGCTCAACGAAGGTATTGATGTTAATGGCATTGATCTTGATGGCCGTACTGCTCTTCATATCGCTGCCTGTGAAGGACATGTTGATGTTGCGAAGCTTTTGCTCAGCCGTAAGGCCAATCTTGATGCTCGTGATCGTTGGGGTAGTACGGCAGCGGCTGATGCTAAATATTATGGAAATACAGAAGTTTATTATATGTTGAAGGCGCGTGGAGCAAAAGTGCCGAAAACCAGGAAGACTCCAATGACTGTTGCAAATCCTCGTGAAGTTCCTGAATATGAACTCAATCCGTTAGAACTACAGGTTCGGAAGAGTGATGGTATTTCAACGGGGACATATCAAGTAGCTAAATGGAATGGCACAAAGGTTGCGGTGAAGATACTTGATAAGGACAGTTATTCAAATCCTGATACCATAAATATTTTCAAACACGAGCTCACACTATTGGAAAAGGTGCGACATCCTAATGTGGTCCAGTTTGTTGGAGCTGTCACCCAAAACATACCTATGATGATTGTTCGAGAGTACCATGCTAAGGGTGACTTAACAGGTTATATTCAAAAGAAAGGGCGTTTGTCCCCATCAAAAGTTCTACGGTTTTCTCTTGATATTGCTAGGGGCATGAATTATCTTCATGAATGCAAGCCAGATCCTATTATCCACTGTGATTTAAAGCCAAAAAATATTTTGCTGGATAATGGAGGTCAATTGAAGGTAGCTGGATTTGGCACTGTGAGATTTTCACTAATAACACCCGACAAAGCATTGTTAGAACAGCCTGATGCCAACATTGACCCTTCAAGCTTGTACGTGGCACCAGAGATTTACAGAGGTGATGTATTTGATAGAAGTGTGGATGCGTATTCTTTTGGTCTCATTGTATATGAGATGATAGAGGGTATACCGCCCTTCCATCCCAAGCCCGCAGAGGAAGCTTTGAAACTGATGTGTTTAGAAGGGAAGAGACCACAATTCAAGATCAAAACAAAAAGTTATCCTCCGGATTTGAAAGAGTTGATTGAGGAATGCTGGGATCCAGAACCTGAGGTCAGACCAACATTTTCTCAGGTCATTGCCCGGTTGGACAAAATTGTTGCGAATTGCTCAAAACAAGGATGGTGGAAAGATACTTTTAAACTTCCTTGGAAATAA 1434 0.4393 MENIAAQLKRGISRQFSSGSLRKTLSRQFTRQASLDPRRNNLRFSFGRQSSLDPIRRSPGDDEDQAELTVPENLDSTMQLLFMACRGDVKGVEDLLNEGIDVNGIDLDGRTALHIAACEGHVDVAKLLLSRKANLDARDRWGSTAAADAKYYGNTEVYYMLKARGAKVPKTRKTPMTVANPREVPEYELNPLELQVRKSDGISTGTYQVAKWNGTKVAVKILDKDSYSNPDTINIFKHELTLLEKVRHPNVVQFVGAVTQNIPMMIVREYHAKGDLTGYIQKKGRLSPSKVLRFSLDIARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKVAGFGTVRFSLITPDKALLEQPDANIDPSSLYVAPEIYRGDVFDRSVDAYSFGLIVYEMIEGIPPFHPKPAEEALKLMCLEGKRPQFKIKTKSYPPDLKELIEECWDPEPEVRPTFSQVIARLDKIVANCSKQGWWKDTFKLPWK 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04112 477 CDD STKc_MAP3K-like 202 455 - -
Mepo2g04112 477 Gene3D Transferase(Phosphotransferase) domain 1 273 473 - -
Mepo2g04112 477 SUPERFAMILY Protein kinase-like (PK-like) 207 455 IPR011009 -
Mepo2g04112 477 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 142 458 - -
Mepo2g04112 477 Pfam Protein tyrosine and serine/threonine kinase 204 455 IPR001245 GO:0004672|GO:0006468
Mepo2g04112 477 FunFam Integrin-linked protein kinase family 272 471 - -
Mepo2g04112 477 ProSiteProfiles Ankyrin repeat profile. 108 140 IPR002110 GO:0005515
Mepo2g04112 477 SMART ANK_2a 76 104 IPR002110 GO:0005515
Mepo2g04112 477 SMART ANK_2a 108 137 IPR002110 GO:0005515
Mepo2g04112 477 Gene3D - 48 187 IPR036770 -
Mepo2g04112 477 FunFam Integrin-linked protein kinase 1 47 187 - -
Mepo2g04112 477 FunFam serine/threonine-protein kinase STY46-like 189 272 - -
Mepo2g04112 477 ProSiteProfiles Ankyrin repeat region circular profile. 108 140 - -
Mepo2g04112 477 Pfam Ankyrin repeats (3 copies) 82 168 IPR002110 GO:0005515
Mepo2g04112 477 PIRSF ILK 8 476 - -
Mepo2g04112 477 SMART serkin_6 196 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g04112 477 SUPERFAMILY Ankyrin repeat 77 177 IPR036770 -
Mepo2g04112 477 ProSiteProfiles Protein kinase domain profile. 192 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g04112 477 Gene3D Phosphorylase Kinase; domain 1 188 271 - -
Mepo2g04112 477 ProSitePatterns Serine/Threonine protein kinases active-site signature. 313 325 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04112 Mepo-Chr2 50045244 50051217 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04112 1 476 MAP Kinase Kinase Kinase AT2G43850 77.197 0.0 798
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Mepo2g04112 PK_Tyr_Ser-Thr 6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04112 - - gmx:100810411 872.848