Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04097 ATGGGTAATTGTTGCTATAAGTGGGATTCATCAGATTATAGAGTCTCATCCAATGCAAAATCAGAACAAAACCAGGTGGCAATGAAAGAAAGGCACGATGATAGTAAGTTACCGTCGAATCCTGAAGAAGTTGAAGATCTTAGGCGTGATAATTCAGCTGCAAATCCATTGATTGCATTCACCTATGATGAGCTAAAGAAAATAACTGGGAATTTCAGACCAGATCGTGTGTTAGGGGGAGGTGGATTTGGAAGTGTTTATAAAGGATTTATTTCTGAAGAGTTAAGGGAGGATCTTCCTTCTCTTCCTGTAGCTGTTAAGGTTCATGATGGTGACAATAGTCATCAAGGCCACAGAGAATGGCTGGCAGAAGTGATATTTTTGGGGCAGCTTTCACATCCAAATTTGGTCAAATTAATTGGATACTGCTGCGAAAACGAACATAGGGTGCTAATATACGAGTACATGGCCAGAGGAAGTGTGGAACACAATTTGTTCTCAAAAATTTTGCTTCCATTGCCATGGTCGATAAGAATGAAGATTGCATATGGCGCTGCAAAGGGACTTGCATTTCTTCACGAAGCAAAGAAACCTGTCATCTATCGTGATTTTAAGACATCAAATATTTTATTGGACCTGGACTATAATGCAAAGCTTTCTGACTTTGGCCTTGCTAAAGATGGACCAGTTGGAGACATGTCCCATGTTTCTACTAGAATAATGGGAACATATGGATATGCTGCACCAGAATACATTATGACAGGTCATTTGACTCCAAGAAGTGATGTTTATAGTTTTGGTGTTGTTCTTCTTGAACTTTTGACTGGAAGAAAATCTTTAGACAAACAAAGACCAGCTAGAGAGCAGAACCTAACAGATTGGGCTCTTCCATTGCTCAAAGAAAAGAAGAAAGTGCTAAATATTATAGATCCAAGGTTGGAAGGTGATTATCCAGTAAAAGGAGCTCATAAGGCTGCAATGCTTGCATATCATTGTTTAAACAAGAATCCAAAAGCAAGGCCTTTAATGAGAGACATTGTTGATTCATTGGAGCCTTTGACAACATACACTGAGGTCCCTATTGGAAAAACATTTACCATAATCACTGAAGTTGCTGAAAGTGATGTTAAAAGGAAAGATGCAGAATGA 1149 0.3882 MGNCCYKWDSSDYRVSSNAKSEQNQVAMKERHDDSKLPSNPEEVEDLRRDNSAANPLIAFTYDELKKITGNFRPDRVLGGGGFGSVYKGFISEELREDLPSLPVAVKVHDGDNSHQGHREWLAEVIFLGQLSHPNLVKLIGYCCENEHRVLIYEYMARGSVEHNLFSKILLPLPWSIRMKIAYGAAKGLAFLHEAKKPVIYRDFKTSNILLDLDYNAKLSDFGLAKDGPVGDMSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLELLTGRKSLDKQRPAREQNLTDWALPLLKEKKKVLNIIDPRLEGDYPVKGAHKAAMLAYHCLNKNPKARPLMRDIVDSLEPLTTYTEVPIGKTFTIITEVAESDVKRKDAE 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04097 382 MobiDBLite consensus disorder prediction 25 48 - -
Mepo2g04097 382 PANTHER OS01G0588500 PROTEIN-RELATED 30 353 - -
Mepo2g04097 382 SUPERFAMILY Protein kinase-like (PK-like) 50 350 IPR011009 -
Mepo2g04097 382 Pfam Protein tyrosine and serine/threonine kinase 75 350 IPR001245 GO:0004672|GO:0006468
Mepo2g04097 382 ProSiteProfiles Protein kinase domain profile. 72 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g04097 382 Gene3D Phosphorylase Kinase; domain 1 32 155 - -
Mepo2g04097 382 FunFam Serine/threonine-protein kinase BIK1 38 155 - -
Mepo2g04097 382 Gene3D Transferase(Phosphotransferase) domain 1 156 364 - -
Mepo2g04097 382 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Mepo2g04097 382 ProSitePatterns Protein kinases ATP-binding region signature. 78 107 IPR017441 GO:0005524
Mepo2g04097 382 MobiDBLite consensus disorder prediction 16 48 - -
Mepo2g04097 382 FunFam Probable serine/threonine-protein kinase PBL8 156 369 - -
Mepo2g04097 382 CDD STKc_IRAK 78 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04097 Mepo-Chr2 49920389 49928197 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04097 31 355 Glycoside Hydrolase AT3G07070 49.102 7.91e-103 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mepo2g04097 PK_Tyr_Ser-Thr 1.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04097 - - psat:127105028 686.411