Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04069 ATGGGAATCCATGGTCTGTTACCGCTTCTCAAATCAATTATGATTCCAATTCACATCAAAGATCTTCACGGCTGTTCTGTCGCCATCGACACTTACTCCTGGCTTCACAAAGGTGCCCTTTCTTGCAGCACCGACCTCTGTAAAGGCATACCCACTTCTAGGCACATTGAGTATTGTATGCATAGAGTGAATTTGCTGAGACATTATGGTGTCAAGCCTATTCTTGTATTTGATGGAGGGCTTTTACCAATGAAGGGTGATCAAGAGAACAAGCGTGCCCGTTCTAGAAAAGAAAATTTGGAGCGTGCGGTTGAACATGAATCAAATGGAAATTCTACTGCTGCCTACGAGTGCTATCAGAAAGCTGTTGATATTTCGCCTCAGATTGCACGAGAACTTATTCAGGTATTGAAGCAAGAGAATGTGCGGTATGTTGTTGCCCCATATGAGGCAGATGCCCAGATGACATTTTTGGCAATTAGCAAACAGGTTGATGCAGTTATAACCGAAGACTCTGATCTTATACCATTTGGTTGTCCAAGGATTATCTTTAAAATGGACAAGTTTGGTCAAGGTGTTCAGTTTCAGTATTCCATGCTACAAAAGAATAAGGAGCTTAATTTTGAAGGGTTCAACAGACAAATGCTTCTTGAAATGTGTATTCTAAGTGGCTGCGACTATCTTCAGTCCTTACCAGGTATGGGTCTCAAAAAGGCTCATGCAAGCATTAAAAGATTTAAAAGCTATGACAAGGTTCTTAAGCACTTGAAATACAATGGTGTTTCTGTACCTCCCTTTTATGAAGAGTCGTTCAGGAAGGCTATTCTTACTTTCCAATATCAACGAGTTTATGATCCAGTTAGTGAAAATATTGTCCATTTGGCCAATATACCTGAGGACATTGGTGACGAGTTAGACTTTTTAGGCCCACCATTGCCAAAAGATATAGGACAAGGAATAGCAGAAGGAGATCTTGATCCAATTACCAAAATGCCATTTGAGGGAGACAAATTTGTTGCCAGATTGGAAATTGCAGGAACTAGTCAATTCAAAACACTTAATTCTGATAGGGTGAAGAAAAGGATTGATCTGCCTGTGCAGAAGAATCTCTTGACCAAGTATTTTTGTTTTGCATCTCTTGAAGCAAAGAGGGAATTCAAAGCGCCTCGGACGTCACCTACCACTGCTAATCAAAGTACACTGATTTCCTCTTCTGTCAATTCCCTAGAACATCAGACATTAGAAGCTGCTGCTAGAGAAACAGTGAACTCTGGTGCATCCACAGTTGACACTGAGAATTGTGACAGCAGCCTTCCTCCTAATAGCTATATTGAAAACAGTTTTCCCACCAAAACTTTGGAGCTTATGGAATCACCAAATCATGTATCTATGGCAGGAGAGAAGAAAGGAAGTCCTGATCATACAATATTGAGACAGCCGAGGCAGCCAATTCATAAACCTTGCTTGGGGTTGCACAAGGAGCATGAGCTCACGAATGTCGAAGACAAAGCCGAAGAGAAAACCAAGGAGACAAAAAGAAAGGTAATTGTAAGGAGTCGTTATTTTCAGCAGAAACAAGTAGAAAAGAGTGCTTGTGACGAGAAACAAGAGCAGCTGTCCTCTTGCATCGTCATTGAGAGAAAAAATGGCATATCAGGCGGTGATTTATGTAACAACCATTTGAAGAATGAAGACCTGAAAAGGAAGGTCTACCCTAATGACACTATTCAAAGTGAAAATTTGCAGGCCACGAAAACGAATCCTACTTCATCTACTCATGATAATGGTTGCTCTGATCACAATGTTGGTGGGCCATTCAAAGAGAATAGTGCTGAAGAAGAAAATTTTGGAACAAACATTTCCCATTTAGGCCATTATTCACAAATATCTGAGAAGTCTTTGGAAAGATTTGCCTCTGTAATATCAGCTTTTAAATATACCTCCGGCTCCCGTGTCAGCGGTCTTCGTGCTCCTCTGAAAGATGTTCGCAACACTCATAATAAGAGGCCTGCAGCTGTGGACTTGAGCCAATATGCATACGTGCCAAAACCAACAAAGACTAGAAGAGTAGCTCCTGATATTCGCAACACTCGCAATACTAGGCCAAAAGCTGTGGACTTGAACCAATTTGCATATGTACCAAAACAAAGACTAGATGAATAG 2163 0.4101 MGIHGLLPLLKSIMIPIHIKDLHGCSVAIDTYSWLHKGALSCSTDLCKGIPTSRHIEYCMHRVNLLRHYGVKPILVFDGGLLPMKGDQENKRARSRKENLERAVEHESNGNSTAAYECYQKAVDISPQIARELIQVLKQENVRYVVAPYEADAQMTFLAISKQVDAVITEDSDLIPFGCPRIIFKMDKFGQGVQFQYSMLQKNKELNFEGFNRQMLLEMCILSGCDYLQSLPGMGLKKAHASIKRFKSYDKVLKHLKYNGVSVPPFYEESFRKAILTFQYQRVYDPVSENIVHLANIPEDIGDELDFLGPPLPKDIGQGIAEGDLDPITKMPFEGDKFVARLEIAGTSQFKTLNSDRVKKRIDLPVQKNLLTKYFCFASLEAKREFKAPRTSPTTANQSTLISSSVNSLEHQTLEAAARETVNSGASTVDTENCDSSLPPNSYIENSFPTKTLELMESPNHVSMAGEKKGSPDHTILRQPRQPIHKPCLGLHKEHELTNVEDKAEEKTKETKRKVIVRSRYFQQKQVEKSACDEKQEQLSSCIVIERKNGISGGDLCNNHLKNEDLKRKVYPNDTIQSENLQATKTNPTSSTHDNGCSDHNVGGPFKENSAEEENFGTNISHLGHYSQISEKSLERFASVISAFKYTSGSRVSGLRAPLKDVRNTHNKRPAAVDLSQYAYVPKPTKTRRVAPDIRNTRNTRPKAVDLNQFAYVPKQRLDE 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04069 720 MobiDBLite consensus disorder prediction 575 598 - -
Mepo2g04069 720 CDD H3TH_EXO1 214 285 IPR037315 GO:0003677|GO:0035312
Mepo2g04069 720 ProSitePatterns XPG protein signature 1. 71 85 IPR019974 GO:0016788
Mepo2g04069 720 SMART xpgn3 1 99 IPR006085 GO:0004518
Mepo2g04069 720 MobiDBLite consensus disorder prediction 420 442 - -
Mepo2g04069 720 CDD PIN_EXO1 1 202 IPR044752 GO:0046872
Mepo2g04069 720 Gene3D - 209 281 - -
Mepo2g04069 720 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 158 178 IPR006084 -
Mepo2g04069 720 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 73 92 IPR006084 -
Mepo2g04069 720 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 24 38 IPR006084 -
Mepo2g04069 720 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 137 154 IPR006084 -
Mepo2g04069 720 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 216 231 IPR006084 -
Mepo2g04069 720 SUPERFAMILY PIN domain-like 2 226 IPR029060 -
Mepo2g04069 720 FunFam exonuclease 1 209 281 - -
Mepo2g04069 720 PANTHER FLAP ENDONUCLEASE FAMILY MEMBER 1 423 IPR006084 -
Mepo2g04069 720 SMART HhH_4 213 246 IPR008918 GO:0003677|GO:0003824
Mepo2g04069 720 MobiDBLite consensus disorder prediction 575 611 - -
Mepo2g04069 720 Pfam XPG N-terminal domain 1 98 IPR006085 GO:0004518
Mepo2g04069 720 MobiDBLite consensus disorder prediction 87 108 - -
Mepo2g04069 720 Pfam XPG I-region 141 226 IPR006086 GO:0004518
Mepo2g04069 720 ProSitePatterns XPG protein signature 2. 141 155 IPR019974 GO:0016788
Mepo2g04069 720 SUPERFAMILY 5' to 3' exonuclease, C-terminal subdomain 211 334 IPR036279 -
Mepo2g04069 720 Coils Coil 90 110 - -
Mepo2g04069 720 Gene3D - 1 207 - -
Mepo2g04069 720 SMART xpgineu 138 213 IPR006086 GO:0004518
Mepo2g04069 720 MobiDBLite consensus disorder prediction 87 105 - -
Mepo2g04069 720 FunFam Exonuclease 1, putative 1 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04069 Mepo-Chr2 49676047 49681741 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04069 1 264 Core DNA Replication Machinery Family AT5G26680 26.429 4.18e-17 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04069 K10746 - gmx:100798062 879.782
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g04069 2 49676047 49681741 Mepo2g04069 2 49676047 49681741 ECH