Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04056 ATGGAAGAAAATTCATCTAGCAATGCAACCAATGAGATTGTTTTGAACGTAAACAAGGATGTCTCTAACAAAAGTGAAGACTCAACCTCTCATGCCACTGCTTCTTTCTTGCAGAAGTTGGTAGCTGAGGTGATAGGCACATATTTCTTGATATTTGCTGGCTGTGCTTCAGTCTTGGTGAACAAGAATAATGAAAATGTTGTAACACTTCCTGGAATTTCAATTGTTTGGGGACTTGCTGTGATGGTGCTGGTTTACTCTCTTGGTCACATCTCTGGTGCTCATTTCAATCCTGCAGTTACCATTGCTTTTGCCAGCACCAAAAGATTTCCCTTGAAACAGGTACCAGCTTATGTAGCAGCTCAAGTCTTTGGATCCACACTTGCAAGTGGAACTCTTAGACTAATATTTAACGGCAAACATAATCAGTTTGTTGGAACACTTCCTGCTGGGTCTGATCTTCAAGCTTTTGTGATTGAATTCATCATCACTTTTTACCTTATGTTTATCATATCTGGAGTTGCCACTGATAATAGAGCGATTGGTGAGTTGGCTGGGATTGCCGTTGGATCTACTGTACTTTTGAATGTGATGTTTGCAGGACCAATCACAGGAGCATCAATGAATCCAGCAAGAAGTATAGGACCTGCTCTTCTACACAGTGAATACAGAGGAATATGGATATACTTGGTGTCTCCTATTCTTGGAGCTGTGGCTGGTGCATGGGTTTATAACGTCATTCGGTACACGGATAAGCCGGTTCGTGAGATCACCAAGAGCTCATCTTTCCTAAAAGCAGCAAAACCATAG 810 0.416 MEENSSSNATNEIVLNVNKDVSNKSEDSTSHATASFLQKLVAEVIGTYFLIFAGCASVLVNKNNENVVTLPGISIVWGLAVMVLVYSLGHISGAHFNPAVTIAFASTKRFPLKQVPAYVAAQVFGSTLASGTLRLIFNGKHNQFVGTLPAGSDLQAFVIEFIITFYLMFIISGVATDNRAIGELAGIAVGSTVLLNVMFAGPITGASMNPARSIGPALLHSEYRGIWIYLVSPILGAVAGAWVYNVIRYTDKPVREITKSSSFLKAAKP 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04056 269 PANTHER AQUAPORIN NIP2-1 19 264 IPR034294 -
Mepo2g04056 269 FunFam Aquaporin NIP1-1 1 257 - -
Mepo2g04056 269 NCBIfam MIP family channel protein 42 244 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo2g04056 269 SUPERFAMILY Aquaporin-like 33 258 IPR023271 -
Mepo2g04056 269 ProSitePatterns MIP family signature. 95 103 IPR022357 -
Mepo2g04056 269 Pfam Major intrinsic protein 33 244 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo2g04056 269 CDD MIP 38 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo2g04056 269 Gene3D Glycerol uptake facilitator protein. 1 260 IPR023271 -
Mepo2g04056 269 PRINTS Major intrinsic protein family signature 114 133 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo2g04056 269 PRINTS Major intrinsic protein family signature 190 212 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo2g04056 269 PRINTS Major intrinsic protein family signature 159 177 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo2g04056 269 PRINTS Major intrinsic protein family signature 227 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo2g04056 269 PRINTS Major intrinsic protein family signature 38 57 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo2g04056 269 PRINTS Major intrinsic protein family signature 77 101 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04056 Mepo-Chr2 49569202 49571947 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04056 18 269 Major Intrinsic Protein MIP AT5G37810 58.661 5.84e-107 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04056 K09874 - gmx:100798526 441.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g04056 2 49569202 49571947 Mepo2g04056 2 49569202 49571947 ECH
Mepo2g04056 2 49569202 49571947 Mepo6g00621 6 6366226 6368093 PCT