Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04052 ATGAAGTGGAGTGGAAGAAAACCTTCTTCAGCTTTGTCGTCGTCTTCTTCTTCTTCTAAGCCTTCCTTCATCTCTCATGTATCTTCTTTTTCATGGTTGTCAAAGTTCAAGCAGATGAAAATCAACTTAGACTCAGAAGCAAAATCCGAAAAGCTGATGCAGAACTCCCCGTCTGATGCAACGACAACAATCAAGCATTATCCCACTCAGAACTCCCCGACTGATAGTACATCACAATTTCCTTGTGAGAATAGAGGCAGGTTTTATGGAGGTAATGGTGATGATGATGCATTCTGGAGATTGTCATTTGGTGAAGAGTTTACTAATGACCAAAAGGAGAAAAGTAAAGATATTCTGAAGCCAGTAATGTACAATTTGGAAGCAAAAAGACATGGAAGAAGAAGAAGAGAAGATAGAAAATTGCTGAATGAAACAAAGAGTGCAAAGGAAGTTGAATGCTTAAAGAGGAGATATGAGAGGAAAGGACAGAGAGTTTTACAAGAACAGCTCTTGAAATTACAGAATGCAGCAGAGGAAGCTGAATTTGTTGCATCAAGTAAATGTAAATCCTTAGAAAAGGATGAGCTTCAATTTGAATCACCAAGAACTCAATTATTTTCCTCTTATGTAGATGCAGAAAGTTCTGGTCTTGGTTTTCAAAGTGAGGAGTTTAAAGCAAAAGTTAACAAAAAGAGGGAATCAGTTCATGTGAGCAGAGAATTACAGAGGAGGAAACCAAAGCAGAGTTCCAAGGTAAGAGTACATTCTCCAAAGATGGCTACTAAGGTCGAAATACGCAAAATGAAAGCGATAGAAGACAAAAAGAAAGCAAAACTAAAGATGAAGAAAGAAGAGGAAATTGTGGAGGAAACAGAAGAAGGGTTAGATAGTTTTGCAGTTGTGAAGTGTTCTTTGGATCCACAACAAGATTTTAGAGATTCAATGATTGAGATGATCAAAGAGAAAGAGATAAGCCAGCCAGAAGAAATGGAAGAGTTATTAGCATGCTATTTGAGTTTGAATTCTAATGAATACCATGATATCATTATCAAAGCGTTTAGACAGGTATGGTTATGTATGAGCCAATCAAGTTTGTGTAATAAATCAGAGAAACGATGTTGTTACTATGATTAG 1134 0.3686 MKWSGRKPSSALSSSSSSSKPSFISHVSSFSWLSKFKQMKINLDSEAKSEKLMQNSPSDATTTIKHYPTQNSPTDSTSQFPCENRGRFYGGNGDDDAFWRLSFGEEFTNDQKEKSKDILKPVMYNLEAKRHGRRRREDRKLLNETKSAKEVECLKRRYERKGQRVLQEQLLKLQNAAEEAEFVASSKCKSLEKDELQFESPRTQLFSSYVDAESSGLGFQSEEFKAKVNKKRESVHVSRELQRRKPKQSSKVRVHSPKMATKVEIRKMKAIEDKKKAKLKMKKEEEIVEETEEGLDSFAVVKCSLDPQQDFRDSMIEMIKEKEISQPEEMEELLACYLSLNSNEYHDIIIKAFRQVWLCMSQSSLCNKSEKRCCYYD 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04052 377 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 160 361 IPR038933 GO:0045892
Mepo2g04052 377 MobiDBLite consensus disorder prediction 235 257 - -
Mepo2g04052 377 MobiDBLite consensus disorder prediction 7 23 - -
Mepo2g04052 377 Pfam Transcriptional repressor, ovate 304 360 IPR006458 -
Mepo2g04052 377 Coils Coil 267 294 - -
Mepo2g04052 377 ProSiteProfiles OVATE domain profile. 300 359 IPR006458 -
Mepo2g04052 377 MobiDBLite consensus disorder prediction 48 81 - -
Mepo2g04052 377 MobiDBLite consensus disorder prediction 47 81 - -
Mepo2g04052 377 MobiDBLite consensus disorder prediction 1 23 - -
Mepo2g04052 377 NCBIfam uncharacterized plant-specific domain TIGR01568 299 360 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04052 Mepo-Chr2 49516265 49517642 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Mepo2g04052 Ovate 2.4e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04052 - - mtr:11406784 535.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g04052 2 49516265 49517642 Mepo2g04052 2 49516265 49517642 ECH
Mepo2g04052 2 49516265 49517642 Mepo6g00609 6 6252016 6253086 PCT