Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04043 ATGATAGCCTTTTGTTTCTTACCATCCTCAACAGCAGCTGACACAGATGCTCAAATTCTAGTGAACTTCAAAAGCTTCTTATCCAATGCAGATGCTTTAAACAATTGGAGCAACGATTCTATTAATGTTTGCACATGGACTGGTTTAATATGCATCAATCAAACTATACTTCATGGTTTGAGACTAGAAAATATGGGACTAAGTGGAACAATTAATGTTGACATCCTTATGAAATTGTCCAATTTGAAGAGTTTTAGTGTTATTAACAATAATTTTGTGGGTCCAATGCCTGCATTCAATAAAATTGTGGGATTAAGGGCATTGTTTCTGACCAAAAATAAATTCTCTGGTGAAATTCCTGATGATGCTTTTGAAGGGTTGAGATGGCTCAAGAGAGTATTCTTAGCAGAAAATGGATTTAAGGGTCATATTCCTAAATCCCTTGCTCAATTGCCTAGACTTTATGATATTGATTTACATGGAAATAGCTTTGATGGCAATATACCGGATTTTCTACAGAGTGGTTTCAGAGTGTTTGATTTATCTAACAATCAATTGGACGGTGCAATACCAGAAGGTTTAAGAAATGAGGATCCAAGTTCTTTTGCAGGCAACAAAGGTCTTTGCGGAAAACCTCTTGAACAGCCCTGCAGCGAAAGCCATAGTGTTCCGCGTGAAGAAGAAAAAGAACCTAAGAAACACCATGTTCTTATTAGTATTATTGCATTTGTGGTAGTGCTTATATTGGCTTTAATACTAGCACTTTTGTTCATTCGTTACCGTAGAAAGAAAGCTGCAGAAAAATCCATTTGGAATATGGAGAATGCACAATCACAGTCTCATAACACCAACGCCAGTACAGTTTCCACTAGTGAGGCCAAATCAATTGTAGTAGAATCCAAGAAAAACAAAGATGAAGATTTGAACTTCGTTACGAATGAAAGGGTTGAGTTTGATTTGCAGGACTTGTTAAGGGCCTCAGCTGAGGTTTTGGGAAGTGGAAGTTTTGGATCAACTTACAAGGCTATGGTATTGACAGGACCAGTAGTTGTTGTGAAAAGATTTAAGCACATGAACAAAGTTGGCAAAAAAGAGTTCTATGATCATATGAGAAGGCTTGGAAGGTTGACACATCCTAATTTACTCCCTCTAGTTGCATTCTATTATGGAAAAGAAGAGAAGCTTTTGATACATGATTTTGCTGAAAATGGCAGCTTGGCAAGTCATCTTCACGGTAGACATTGTGAGTTGGATTGGGCAACACGTTTGAAGATAATCAAAGGAGTGGCAAGAGGTTTGGCTTACCTTTATAGAGAGTTCCCGGACGAAAAGTTACCACATGGACATCTAAAATCCTCCAATGTTGTGTTAAACCATTCATTTGAGCCTTTTTTAACCGAGTATGGACTTGTGGAAGTAACTGACTTGAAGCATGCTCAACAGTTCATGGTAGGCTTCAAGTCCCCAGAGGTGAGTCAACATGAAGGGCCGAGCGAGAAGAGCGACGTATGGTGTTTAGGGATACTTATATTGGAGCTATTGACAGGGAAGTTCCCTGCAAATTATTTGAGGCATGGGAAGGGAGCGAACGAGGATTTGGCAATGTGGGTGGAATCTATAGTGAGGGAAGGGTGGAGTGGAGAAGTGTTGGATAAAAGCATTGGTGGTGGGAGTAGAGGTGAAGAAGGTGAGATGTTGAAGCTGTTGAGGATTGGGATGAGTTGTTGTGAATGGAGTTTGGAGAATAGGTTGGGTTGGAAGGAGGCAGTGGCAAAGATTGAGGAGTTGAAGGAAATGGATCATGTGGGGGTTGGAGGAGTTCAGAAGCTTGAAACATCTCTTTACGAACCCGATGGTTTTAAATTTAAACCTTCACTCCCCATTAAGCTGGCTCTTGTAAAGCCTCCTGTCATCGTTAAGCCTCATGTCCCTGTTAAACCTGCTCCTGTCAATGTTAAGCCTTTTGTCCCTCTTACACCTCCTACCCCTAAGTCTGCCCCAATTTCTCCTCCTTCCCCTATTACCCCTGTTACACCTCCTACCCCTGTTACGCATGCACCTGTTAAGCCTAGCTCTTTTACGTCTAATCCGATTTCTATTGAAACCCCGATTGTTATGCCTGTCCCTATTACGCCTACCCTTGTTACACCTCTTGCTGTTACACTTCCCCCAAATGAGCCTCTTGTCCCTGTTACGGCTGTCCTTGTTGAGTCTCCTGTCCCTGTTGAGTCCTATATCCTTGTTATGCTTGCCCCTATTGAGCCTCTTGCCCCTGTTACTATTGCTCCTGTTGAGCCTCCCATTGCTCCTGTTTTTATCGTTTTTGCTTAA 2331 0.414 MIAFCFLPSSTAADTDAQILVNFKSFLSNADALNNWSNDSINVCTWTGLICINQTILHGLRLENMGLSGTINVDILMKLSNLKSFSVINNNFVGPMPAFNKIVGLRALFLTKNKFSGEIPDDAFEGLRWLKRVFLAENGFKGHIPKSLAQLPRLYDIDLHGNSFDGNIPDFLQSGFRVFDLSNNQLDGAIPEGLRNEDPSSFAGNKGLCGKPLEQPCSESHSVPREEEKEPKKHHVLISIIAFVVVLILALILALLFIRYRRKKAAEKSIWNMENAQSQSHNTNASTVSTSEAKSIVVESKKNKDEDLNFVTNERVEFDLQDLLRASAEVLGSGSFGSTYKAMVLTGPVVVVKRFKHMNKVGKKEFYDHMRRLGRLTHPNLLPLVAFYYGKEEKLLIHDFAENGSLASHLHGRHCELDWATRLKIIKGVARGLAYLYREFPDEKLPHGHLKSSNVVLNHSFEPFLTEYGLVEVTDLKHAQQFMVGFKSPEVSQHEGPSEKSDVWCLGILILELLTGKFPANYLRHGKGANEDLAMWVESIVREGWSGEVLDKSIGGGSRGEEGEMLKLLRIGMSCCEWSLENRLGWKEAVAKIEELKEMDHVGVGGVQKLETSLYEPDGFKFKPSLPIKLALVKPPVIVKPHVPVKPAPVNVKPFVPLTPPTPKSAPISPPSPITPVTPPTPVTHAPVKPSSFTSNPISIETPIVMPVPITPTLVTPLAVTLPPNEPLVPVTAVLVESPVPVESYILVMLAPIEPLAPVTIAPVEPPIAPVFIVFA 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04043 776 SUPERFAMILY Protein kinase-like (PK-like) 329 596 IPR011009 -
Mepo2g04043 776 Gene3D Ribonuclease Inhibitor 176 217 IPR032675 -
Mepo2g04043 776 Gene3D Transferase(Phosphotransferase) domain 1 401 607 - -
Mepo2g04043 776 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 6 598 IPR046959 -
Mepo2g04043 776 Pfam Protein kinase domain 328 530 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g04043 776 SUPERFAMILY L domain-like 22 196 - -
Mepo2g04043 776 MobiDBLite consensus disorder prediction 662 686 - -
Mepo2g04043 776 FunFam pollen receptor-like kinase 1 294 400 - -
Mepo2g04043 776 MobiDBLite consensus disorder prediction 662 687 - -
Mepo2g04043 776 Pfam Leucine rich repeat N-terminal domain 13 51 IPR013210 -
Mepo2g04043 776 Pfam Leucine rich repeat 104 163 IPR001611 GO:0005515
Mepo2g04043 776 Gene3D Ribonuclease Inhibitor 12 173 IPR032675 -
Mepo2g04043 776 ProSitePatterns Protein kinases ATP-binding region signature. 331 353 IPR017441 GO:0005524
Mepo2g04043 776 Gene3D Phosphorylase Kinase; domain 1 289 400 - -
Mepo2g04043 776 ProSiteProfiles Protein kinase domain profile. 325 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04043 Mepo-Chr2 49440969 49444610 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04043 1 613 Receptor kinase-like Gene Family AT4G31250 43.969 4.05e-179 527
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mepo2g04043 Pkinase 2.3e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04043 - - tpra:123914566 1020.38