Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04024 ATGAAACAACGTTCCAAGATGAAAAAATGGGCTATCTCATTACCAGTTATGATGAACACAACAAACACAAAGGTTGAGAAAACAGGACCATTTGAGTTTGAAACAGAATCAGGTTCAACATGGGTTGCAGATGTGAAAGAACCAACATCTGCACCAGTGGTGATGTTTGAGAAGCCATTGATGAACTTCACATTCAAAGATCTCATCATTGCCACGTCACATTTCGGGAAAGAGTCACAGCTAGCAGAAGGAAGGTGTGGACCAGTGTATTGGGCCGTGTTACCCGGTGAAATACACGTGGCAATCAAAGTTCTTGAACATGTCAGAGACGTTGATTATGATGACTCTGTGGCTATGTTTGTTGACCTATCGAAACTGAAACATCCAAACTTGTTGCCTCTTTCTGGTTACTGTATTGCAGGTAAGGAAAAGCTAGTGTTGTACGAGTTTATGGCAAATGGCGATTTAGGTAGATGGCTACACGAGCTTCCAACCGGGGATACCAACATCGAGGATTGGACTAGCGACACGTGGGAGTTCCAAAATAGCAATGTCGAATCATCCTCGGAGAAGATGGGTTGGCTAACACGCCACCATATCGCGGTAGGGATAGCTCGTGGTCTTGCGTATCTCCACCACGCAGGTTCAAAACCTATCATACATGGCCACCTTGTCACCTCCAACATTTTACTCACTGATAATTTTGAGCCCCGAATCTCCGATTTTGGATTGCGGATCTACTCATGTCCTAATGGTGGCACCGAGGATGATGTGTACTGCTTTGGAATGGTGTTAATGGAACTTCTGACTGGGAGGATTGGCACGATGGCAACAATCGTTGAGGTCAGAAAGGCCGTGAAAGAGGGACAACATGTTAGAGTCCTTGATGAGAGGTTGCTACATGGAGGTGACTCAGCCGTGAGCGAGATGGTAGAGAGCCTCATAATTGCTTTCTTGTGCATGGCTGAGTCGCCTTCCAAGAGACCTACCATGCAACAGGTTTTGGGTTTACTCAAAGATATTCATCCTCATGAATTACTTGTTTCAAGTTGA 1053 0.4511 MKQRSKMKKWAISLPVMMNTTNTKVEKTGPFEFETESGSTWVADVKEPTSAPVVMFEKPLMNFTFKDLIIATSHFGKESQLAEGRCGPVYWAVLPGEIHVAIKVLEHVRDVDYDDSVAMFVDLSKLKHPNLLPLSGYCIAGKEKLVLYEFMANGDLGRWLHELPTGDTNIEDWTSDTWEFQNSNVESSSEKMGWLTRHHIAVGIARGLAYLHHAGSKPIIHGHLVTSNILLTDNFEPRISDFGLRIYSCPNGGTEDDVYCFGMVLMELLTGRIGTMATIVEVRKAVKEGQHVRVLDERLLHGGDSAVSEMVESLIIAFLCMAESPSKRPTMQQVLGLLKDIHPHELLVSS 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04024 350 Gene3D Transferase(Phosphotransferase) domain 1 151 251 - -
Mepo2g04024 350 FunFam Putative LRR receptor-like serine/threonine-protein kinase 36 150 - -
Mepo2g04024 350 PIRSF ILK 246 346 - -
Mepo2g04024 350 PIRSF ILK 190 253 - -
Mepo2g04024 350 PIRSF ILK 16 168 - -
Mepo2g04024 350 Gene3D Transferase(Phosphotransferase) domain 1 252 346 - -
Mepo2g04024 350 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 24 341 - -
Mepo2g04024 350 SUPERFAMILY Protein kinase-like (PK-like) 52 338 IPR011009 -
Mepo2g04024 350 ProSiteProfiles Protein kinase domain profile. 75 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g04024 350 Gene3D Phosphorylase Kinase; domain 1 35 150 - -
Mepo2g04024 350 Pfam Protein tyrosine and serine/threonine kinase 78 245 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04024 Mepo-Chr2 49235265 49236900 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04024 46 341 Receptor kinase-like Gene Family AT5G07280 36.778 4.25e-53 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Mepo2g04024 PK_Tyr_Ser-Thr 2e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04024 - - gmx:100809704 544.658