Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04017 ATGTCAGATGGATATGAGAAACATGAGAATGAGAGGAGTACTGGGAAGAGTGAAGAAGAACATGCTGAGGACACTTCAATGGGATCTTCACATAAGTGTTCAATATCCTTTGATTTGAATGAAGAAGCTAGTAGTGATCAAGATGTTAAGAATGAGGAGAATGATCATGAATTAGTCAATAATGGTGATGATGATGATGAGAAATTAGCAAAGGATGATGATGAAGGTAGTTCAAGTTCAACAAAAAGAAGTAGTGGATCAAATGAAAGAAGAAGAAATGGTGTAAGACAATATGTTAGATCAAAGATGCCTAGGCTTAGGTGGACACCTGATCTTCATCACTCCTTTATGCATGCTGTTGAAAGACTTGGAGGCCAAGAGAGAGCAACACCCAAATTGGTGCTTCAGCTGATGAATGTGAGAGGACTCAGCATTGCTCATGTCAAGAGTCACTTGCAGATGTACCGGAGCAAGAAACTTGACGAGGCTGGACAAGTACTAAGTCCAACACACAGATCAACCCATGAATTAGGTTCCATTTCTCACCATGTAGCCCATCAGTCCATGATACCTCATCAACATTTCAAGATGGCAAATGGTGGAATTGTTCTGGAAACTAATTACAACCAGCACAGTTATAATTTCCACAGTCTTCTGCATCCCTCATCCTTATCACATTCACATTCACATTCAAAGCCCATCAATTCAAGGCACCAAGAATGGTACTTAAATCATCAATCTTGGAGACCAAGCTACATGAGCAATGAATTAGTTATGCCATCAACAGCCTTAAATACACAAGGAAGATCATCCATAAGTTTGAACCAGCAGCTTCAAGTTAAGGATACTACGGTCACTACCACACTTGCTCCAATGAGACCAAGCCAATTTCTTGAAGAGAAAAGATGGCCTCCCTTAGATATCATGAACAATCATCCATATTGGAAGAAAAATTTACATGATAATTTTTCTAGTGATAGAACATCATTTAGACCCGCTGAGGTGAGCTTTGGAAACAACACAAGAAGCAGGGAAAACATATCAAACATCAACAATGACCACAACTATTTTAATAGTTCAAAGATTGAATTTGATCCCCCGTTTCGGATTAAGTTGAATCAAGAGACATTGCTGAAAGACAAACAATGGGTGCCTGATTTGCAACTGAGTTTAAGTCAAACAAACGGCAACAATGATGGCAAGAGTGATGGTTTGAGAGAAACCAAAGAAATCGACACGAAACTCTCACTTTCTTAG 1257 0.3914 MSDGYEKHENERSTGKSEEEHAEDTSMGSSHKCSISFDLNEEASSDQDVKNEENDHELVNNGDDDDEKLAKDDDEGSSSSTKRSSGSNERRRNGVRQYVRSKMPRLRWTPDLHHSFMHAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDEAGQVLSPTHRSTHELGSISHHVAHQSMIPHQHFKMANGGIVLETNYNQHSYNFHSLLHPSSLSHSHSHSKPINSRHQEWYLNHQSWRPSYMSNELVMPSTALNTQGRSSISLNQQLQVKDTTVTTTLAPMRPSQFLEEKRWPPLDIMNNHPYWKKNLHDNFSSDRTSFRPAEVSFGNNTRSRENISNINNDHNYFNSSKIEFDPPFRIKLNQETLLKDKQWVPDLQLSLSQTNGNNDGKSDGLRETKEIDTKLSLS 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04017 418 Pfam Myb-like DNA-binding domain 106 156 IPR001005 -
Mepo2g04017 418 NCBIfam myb-like DNA-binding domain, SHAQKYF class 104 159 IPR006447 GO:0003677
Mepo2g04017 418 MobiDBLite consensus disorder prediction 1 27 - -
Mepo2g04017 418 MobiDBLite consensus disorder prediction 390 418 - -
Mepo2g04017 418 MobiDBLite consensus disorder prediction 43 96 - -
Mepo2g04017 418 FunFam Myb family transcription factor 102 160 - -
Mepo2g04017 418 Gene3D - 103 160 - -
Mepo2g04017 418 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 81 223 IPR046955 GO:0003700
Mepo2g04017 418 SUPERFAMILY Homeodomain-like 102 158 IPR009057 -
Mepo2g04017 418 MobiDBLite consensus disorder prediction 402 418 - -
Mepo2g04017 418 MobiDBLite consensus disorder prediction 28 42 - -
Mepo2g04017 418 MobiDBLite consensus disorder prediction 1 99 - -
Mepo2g04017 418 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 100 160 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04017 Mepo-Chr2 49175267 49178408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04017 93 161 G2-like Transcription Factor Family AT2G42660 79.710 2.71e-33 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mepo2g04017 Myb_DNA-binding 1.8e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04017 - - mtr:11419043 780.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g04017 2 49175267 49178408 Mepo2g04017 2 49175267 49178408 ECH
Mepo6g00569 6 5818496 5824269 Mepo2g04017 2 49175267 49178408 ECH
Mepo2g04017 2 49175267 49178408 Mepo6g00569 6 5818496 5824269 PCT