Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04007 ATGGATCAGGGAACAAGTAAAGGTAGTGGTGAAATGTTGGATCATGTTGATAAAGGGATTGATGAGAATTTCAGTCATTTGGTTGAAGGAGTTGCAACTGATTCAGGAGCTGGGCATAGTTTGGGTGATAGGGTTAGTGAATGCCGAGAAGATCGGAATTCAGAAGAGATGTGCAATGATCTTGTATTGAATGAGGAGGTAAAGGAGAAAGCTTTAGAAGTTAGATTGCAAAATATTGGCGGTGATCCTGAAAAAATCGACGATGAATTGCATAGGGTTGATCAAGGGACTAGTTATAATTTGCTTAATCGGGAAACACTAGAGACCTGTGTTGTAATAGTTTCTTCTGCTCAAGTTGAACGGGTCACTGTCAATGGAGATAATAGAAAATTGGAAGCTAAAACTAATGAATCAGGGCTGCGCAAGATTTGCCATCTGGCCTCTGGGCAACCGTTAGAAGCAACTGCTGTTGGCACTCCAAATATTGCTGATAAAAGTACAGGTTTGATAATGCTTGGTTGTGCATGTAAAGATGAGCTAGGAATCGCACACAGCCATTGCGCTGAGGCATGGTTCAAGATTTAA 585 0.412 MDQGTSKGSGEMLDHVDKGIDENFSHLVEGVATDSGAGHSLGDRVSECREDRNSEEMCNDLVLNEEVKEKALEVRLQNIGGDPEKIDDELHRVDQGTSYNLLNRETLETCVVIVSSAQVERVTVNGDNRKLEAKTNESGLRKICHLASGQPLEATAVGTPNIADKSTGLIMLGCACKDELGIAHSHCAEAWFKI 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04007 194 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 136 194 IPR013083 -
Mepo2g04007 194 PANTHER ZINC FINGER, RING-CH-TYPE 39 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04007 Mepo-Chr2 49097237 49097941 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04007 142 194 C3H Transcription Factor Family AT2G37950 41.509 2.24e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04007 - - gmx:100791129 231.876