Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03999 ATGGCTATGTCGTGCGGGGTAATGATCATTTTCATTGCCTTGGTAACATGGATATGTCTGTTTACCTATCTTTTACCGGAACGTGTATGCAACATTCTATATGGGTTCCCATGCGGAATCATATTCAAAGAATCATTTGGAGAGGGGTGTGCGAATCCCAGTTTCGAAGTGATATGTGAAAACAACAAATCCGTAATTTACTTCAACTATGGCGAAAGTCACGCCCACGCCATTATAGCTTCTAATTCTTCATCATTCCGTTACATCAAAACTGGAGTTAGTCCCGATAATAACTGTCCTATCATCAATTTCCTTTCTCTTCCAAACGAAAAAGTTTCCTTCTTTCCCGATTCTTATCATCAGACATATATGATGGTTATGAGATGCGAAAAACCGGTAGATTATGACAAGTATTGGAATATTTCTCCACGGAGATGTGGTTGTAGTGGAATTGATGGCGAGGAAAAACAACTTTATTATTTATATGCACTAGAGGATTCCTACGACGAAGATTATTCTTTTGTGAGAAACATAGCAAAGTCATGCAGAGTAGAGACGAAGGTAATGATTAGTTGGTGGGATGCAAAGGTGAAATGTAATAGCAAATGTGGGTATCCAGAGGTTCACAGTGAGCACGTGAATGGAATTGAGCTTCGTTGGCGACCAATTCGCTGTGAACAGCAGCAGAAAGACATAGACAGAGAGAGTCGCCGGGAATGGGGAAGGGCACGATTGCCACTCCGCTGCATTTACTTAGATGCAGCATACACTTGCCTTGAAATCGGAAAAACTCTGCTCGCATGGGTTGTTGCAAAATTTGTTCTTGGATCACCCTTTGTGGTTGCGGTCTTGATATGTAAATGGAGAAAAAAGCATTTATCAATATATGACACGGTTGAAGATTTTATCCAAAGTCACAACAATTTCATGCCCATTAGATATTCTTACTCTCAAATTAAAACAATGACCAAACATTTCAAGAATAAGTTGGGAGAAGGAGGCTACGGTTCTGTCTATGAAGGAGACCTTCGAAGCAAACACAAAGTAGCTGTTAAGTTATTGACCAAGTCCCAAACCAATGGACAAGACTTCATCAATGAAGTTGCAACAATCGGAAGCATTCGTCATGTCAATGTGGTGCAGCTGATTGGATTTTGTGCAGAAAGAACTAAGCAAGCTTTGATCTATGAGTTCATGCCTAATGGTTCTCTTGATAAACACACATTTTCACAAGAGCAAGGAAACTCGTTCTCATTAAGCTATGATAAAATCTATAACATTGCTCTTGGAATCGCTCGTGGAATTCAATACTTACATCAAGGTTGTGACATGCAAATCATACATTTTGATATAAAACCTCATAACATTCTTCTTGATGAGAATTTCAACCCGAAAATATCTGACTTTGGTTTGGCGAAGTTGTACCGAATAGATCAAAGCATTTTAACTTTAACAGCAGCAAGAGGAACAATGGGGTACATGGCTCCAGAGTTGTTGTACAAGAACATTGGAAGCATATCTCACAAAGCTGACGTTTATAGTTTTGGAATGATGTTGATGGAAATAGCAGGTAGAAAAAAGAACAAAGATTGTATAGAGAATTATTAG 1608 0.3893 MAMSCGVMIIFIALVTWICLFTYLLPERVCNILYGFPCGIIFKESFGEGCANPSFEVICENNKSVIYFNYGESHAHAIIASNSSSFRYIKTGVSPDNNCPIINFLSLPNEKVSFFPDSYHQTYMMVMRCEKPVDYDKYWNISPRRCGCSGIDGEEKQLYYLYALEDSYDEDYSFVRNIAKSCRVETKVMISWWDAKVKCNSKCGYPEVHSEHVNGIELRWRPIRCEQQQKDIDRESRREWGRARLPLRCIYLDAAYTCLEIGKTLLAWVVAKFVLGSPFVVAVLICKWRKKHLSIYDTVEDFIQSHNNFMPIRYSYSQIKTMTKHFKNKLGEGGYGSVYEGDLRSKHKVAVKLLTKSQTNGQDFINEVATIGSIRHVNVVQLIGFCAERTKQALIYEFMPNGSLDKHTFSQEQGNSFSLSYDKIYNIALGIARGIQYLHQGCDMQIIHFDIKPHNILLDENFNPKISDFGLAKLYRIDQSILTLTAARGTMGYMAPELLYKNIGSISHKADVYSFGMMLMEIAGRKKNKDCIENY 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03999 535 Gene3D Phosphorylase Kinase; domain 1 298 398 - -
Mepo2g03999 535 Gene3D Transferase(Phosphotransferase) domain 1 399 534 - -
Mepo2g03999 535 Pfam Protein kinase domain 326 524 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g03999 535 SUPERFAMILY Protein kinase-like (PK-like) 303 527 IPR011009 -
Mepo2g03999 535 PANTHER RUST RESISTANCE KINASE LR10-RELATED 296 529 IPR045874 GO:0004672
Mepo2g03999 535 FunFam serine/threonine-protein kinase PBS1-like 295 398 - -
Mepo2g03999 535 ProSiteProfiles Protein kinase domain profile. 324 535 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g03999 535 ProSitePatterns Serine/Threonine protein kinases active-site signature. 446 458 IPR008271 GO:0004672|GO:0006468
Mepo2g03999 535 SMART serkin_6 324 533 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g03999 535 FunFam Os07g0541700 protein 399 490 - -
Mepo2g03999 535 ProSitePatterns Protein kinases ATP-binding region signature. 330 352 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03999 Mepo-Chr2 49030781 49033907 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03999 257 526 Receptor kinase-like Gene Family AT1G66910 46.377 4.03e-78 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mepo2g03999 Pkinase 1.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03999 - - tpra:123914142 714.916