Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03988 ATGGATTATCAAAACCAAAAGAGCAACGAGAACAAACACAGAGAGAAACTTATGATGAAGAATAGGTCCAAGTTTGTAGGAGTGAGACAAAGAGCTTCAGGAAAATGGGCAGCAGAGATAAAAGACACATCAAAGAACATTAGGATGTGGCTTGGTACCTATAAAACTGCTGAGGAAGCTGCTCGAGCTTACGATGAAGCTGCTTTTCTCCTTAGAGGTTCAAACACTCGTACCAATTTCTCTACCACTCATTCCATTCCTACCAATTCTCCAATATCTCTCAAACTCAAAAACCTCCTTCATCGTAAATCCATCTCAAATCAAAGTCAAAGTAAAAATCAGTGCACTTTGATGAGTTCCTCTTTACAAGGTGCTTCTATTGATAATAGCATCATGATAATGGAAAATGAAAACAAATCTTCATGTAGTAGTGAAGATTCAAAGTCTTTGTTTTGGGTTCAGAACCAATTAGTATCTGAATATAATCCTTATGTTGTGGATATGAATATGATGAACTGCTCAATGGGTATTACACCAAATACATTGCAGATTGATTATTCTTGGCCATTACCTCAACAAAGGATTAACGAGTTACCAACACTAAATGATAGTGAGAATGTATATGGTATGAATGAGTGCTATGTGGAAGGTACATACGAATCTAAGTATGAATATGATGTCAATTATCCTCTTTCCCACTTGTTCTGTTTTACGTGA 717 0.3626 MDYQNQKSNENKHREKLMMKNRSKFVGVRQRASGKWAAEIKDTSKNIRMWLGTYKTAEEAARAYDEAAFLLRGSNTRTNFSTTHSIPTNSPISLKLKNLLHRKSISNQSQSKNQCTLMSSSLQGASIDNSIMIMENENKSSCSSEDSKSLFWVQNQLVSEYNPYVVDMNMMNCSMGITPNTLQIDYSWPLPQQRINELPTLNDSENVYGMNECYVEGTYESKYEYDVNYPLSHLFCFT 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03988 238 FunFam ethylene-responsive transcription factor RAP2-11 23 82 - -
Mepo2g03988 238 SUPERFAMILY DNA-binding domain 23 82 IPR016177 GO:0003677
Mepo2g03988 238 ProSiteProfiles AP2/ERF domain profile. 24 81 IPR001471 GO:0003700|GO:0006355
Mepo2g03988 238 CDD AP2 23 80 IPR001471 GO:0003700|GO:0006355
Mepo2g03988 238 Gene3D AP2/ERF domain 23 83 IPR036955 GO:0003700|GO:0006355
Mepo2g03988 238 Pfam AP2 domain 23 73 IPR001471 GO:0003700|GO:0006355
Mepo2g03988 238 PRINTS Ethylene responsive element binding protein signature 47 63 IPR001471 GO:0003700|GO:0006355
Mepo2g03988 238 PRINTS Ethylene responsive element binding protein signature 25 36 IPR001471 GO:0003700|GO:0006355
Mepo2g03988 238 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 10 127 - -
Mepo2g03988 238 SMART rav1_2 24 87 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03988 Mepo-Chr2 48944673 48945444 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03988 1 101 AP2-EREBP Transcription Factor Family AT5G19790 63.366 1.44e-37 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo2g03988 AP2 6e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03988 K09286 - gmx:100803832 275.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g03988 2 48944673 48945444 Mepo2g03988 2 48944673 48945444 ECH