Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03962 ATGGATTCAAATTCCCATGGAAATCTCGATGAGCAGATTTCTCAGCTCATGCAGTGCAAACCCCTGTCCGAGCAAGAGGTTAGGGTCTTGTGTGATAAGGCAAAAGAGATTTTGATGGAAGAAAGCAATGTGCAGCCTGTAAAAAGTCCTGTTACAATATGTGGTGATATTCATGGGCAATTCCACGATCTGGCAGAGCTTTTCCGCATCGGAGGGAAGTGTCCAGATACTAATTACTTGTTTATGGGAGATTACGTCGATCGTGGCTATTATTCTGTCGAAACTGTAACGCTTTTGGTCGCCCTTAAAGTGCGTTATCGTCAGCGTATCACTATTTTGAGGGGAAATCATGAAAGTCGCCAGATTACTCAAGTTTATGGATTCTATGACGAGTGCCTACGAAAGTATGGCAGTGCTAATGTTTGGAAGATGTTTACTGATTTGTTTGACTACTTCCCATTGACAGCATTGGTTGAATCTGAAATATTCTGTCTTCATGGTGGGTTGTCCCCATCCATTGAAACCCTTGACAACATCCGTAATTTTGATCGTGTGCAAGAAGTTCCTCATGAGGGACCCATGTGTGATCTTCTATGGTCTGATCCGGATGATCGTTGTGGTTGGGGTATCTCTCCTAGAGGTGCTGGATATACCTTCGGCCAGGATATATCAGAGCAGTTTAACCATACCAATAATTTGAAGCTGATTGCTAGAGCTCACCAGCTGGTTATGGAAGGATATAACTGGGGTCATGAGCAAAAGGTGGTTACCATATTCAGTGCTCCTAATTATTGTTATCGCTGTGGGAACATGGCATCCATCCTTGAAGTTGATGACTGCAAAGGACACACATTCATTCAGGTTGAGCTTATATTCTTTTTAATTCTTACTCAAACGACTTGTCACTCGGTATTTGCTGAAGCTATGTTAGCATTGTAA 939 0.4249 MDSNSHGNLDEQISQLMQCKPLSEQEVRVLCDKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRQRITILRGNHESRQITQVYGFYDECLRKYGSANVWKMFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYNWGHEQKVVTIFSAPNYCYRCGNMASILEVDDCKGHTFIQVELIFFLILTQTTCHSVFAEAMLAL 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03962 312 Pfam Calcineurin-like phosphoesterase 50 241 IPR004843 GO:0016787
Mepo2g03962 312 FunFam Serine/threonine-protein phosphatase 1 300 - -
Mepo2g03962 312 SUPERFAMILY Metallo-dependent phosphatases 7 291 IPR029052 -
Mepo2g03962 312 Gene3D - 1 291 IPR029052 -
Mepo2g03962 312 ProSitePatterns Serine/threonine specific protein phosphatases signature. 113 118 IPR006186 GO:0016787
Mepo2g03962 312 CDD MPP_PP2A_PP4_PP6 8 289 - -
Mepo2g03962 312 PRINTS Serine/threonine phosphatase family signature 147 173 IPR006186 GO:0016787
Mepo2g03962 312 PRINTS Serine/threonine phosphatase family signature 254 270 IPR006186 GO:0016787
Mepo2g03962 312 PRINTS Serine/threonine phosphatase family signature 50 77 IPR006186 GO:0016787
Mepo2g03962 312 PRINTS Serine/threonine phosphatase family signature 112 136 IPR006186 GO:0016787
Mepo2g03962 312 PRINTS Serine/threonine phosphatase family signature 176 203 IPR006186 GO:0016787
Mepo2g03962 312 PRINTS Serine/threonine phosphatase family signature 79 106 IPR006186 GO:0016787
Mepo2g03962 312 PRINTS Serine/threonine phosphatase family signature 232 252 IPR006186 GO:0016787
Mepo2g03962 312 SMART pp2a_7 22 292 IPR006186 GO:0016787
Mepo2g03962 312 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 7 289 IPR047129 GO:0004722
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03962 Mepo-Chr2 48718254 48726543 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03962 14 238 Calmodulin-binding Proteins AT5G63870 34.082 9.35e-32 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03962 K04382 - gmx:100782279 600.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g03962 2 48718254 48726543 Mepo2g03962 2 48718254 48726543 ECH
Mepo4g02109 4 28274433 28279183 Mepo2g03962 2 48718254 48726543 ECH