Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03933 ATGCGTTGTTACAGCTTAACAATCCCTGGAAGCGATCATCGCTTCATCACACCAACACTGCCTCCTCCTTCACCATCCTTCAGACCCACCATCATACCCATGACCCGAATCTCATTCGGGTCATCCTTCCCAAAGCTTAGAGCCACCTTCAACGACGGCGTGGTGGCGGAGGAACGGAGCTTCTATGATCTTCTGGGTATACCAGAATCCGGTTCATTGATGGATATCAAAAGTGCTTATAAACAACTAGCAAGAAAGTATCACCCGGATGTTTCACCACCGGATCGGGTCGAAGAGTATACCAAGAGGTTTATTCAGGTGCAGGAGGCGTATGAAACTCTGTCTGATCCTTCAAGGAGGATTATGTATGATAGAGATATGGCTAGAGGGATTCATCTTGCTTTCAATGCTCGTAAAAGCTATAATCATTCTGATCAGGTGAGTGAACAAAAGGGTGAATGGAAATCTCGTTGGCAATCTCAACTCGATGGCCTGAAGAGAAGAAGTGATAGCAAGGTCATGGATGCTGCTGAGAATACGTCATGGGCGGCTCGAATACGCCAGCAGAGGAGGGAATTGTGA 582 0.4708 MRCYSLTIPGSDHRFITPTLPPPSPSFRPTIIPMTRISFGSSFPKLRATFNDGVVAEERSFYDLLGIPESGSLMDIKSAYKQLARKYHPDVSPPDRVEEYTKRFIQVQEAYETLSDPSRRIMYDRDMARGIHLAFNARKSYNHSDQVSEQKGEWKSRWQSQLDGLKRRSDSKVMDAAENTSWAARIRQQRREL 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03933 193 SUPERFAMILY Chaperone J-domain 56 132 IPR036869 -
Mepo2g03933 193 PRINTS DnaJ domain signature 99 119 IPR001623 -
Mepo2g03933 193 PRINTS DnaJ domain signature 62 80 IPR001623 -
Mepo2g03933 193 PRINTS DnaJ domain signature 80 95 IPR001623 -
Mepo2g03933 193 ProSiteProfiles dnaJ domain profile. 60 127 IPR001623 -
Mepo2g03933 193 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 56 192 - -
Mepo2g03933 193 CDD DnaJ 61 116 IPR001623 -
Mepo2g03933 193 Pfam DnaJ domain 61 124 IPR001623 -
Mepo2g03933 193 ProSitePatterns Nt-dnaJ domain signature. 104 123 IPR018253 -
Mepo2g03933 193 Gene3D DnaJ domain 47 163 IPR036869 -
Mepo2g03933 193 FunFam Chaperone protein dnaJ 20, chloroplastic 47 156 - -
Mepo2g03933 193 Coils Coil 183 193 - -
Mepo2g03933 193 SMART dnaj_3 59 119 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03933 Mepo-Chr2 48482942 48486506 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03933 56 124 C2H2 Transcription Factor Family AT1G74250 40.278 1.56e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03933 - - adu:107482289 239.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g03933 2 48482942 48486506 Mepo2g03933 2 48482942 48486506 ECH