Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03924 ATGAATTCTGCACCACAATCCTCATCAGCCGCTGCCACCGGCGGAAGCGGAGGAGGTCCGGCACCGTTTCTTCAGAAGACGTATGACATGGTGGATGATTCCACTACAGATGAGATCGTTTCCTGGAGTTCTGATAACAAAAGCTTCATCGTTTGGAACCCTCCTGAATTCTCTCGTGTTCTTCTCCCAACCTATTTCAAGCACAACAATTTCTCCAGCTTCATCCGTCAGCTCAATACCTATGGATTTCGAAAAGCAGATCCTGAGCGTTGGGAGTTTGCCAATGAAGAATTTATAAAAGATCAAAAACATCTTCTGAAGAATATACACCGCAGGAAACCTATCCACAGTCATAGTCATCCTCCGGGTTCTGCTGTAGATCCAGAAAGGGCAGCATTGGAGCAAGAAATAGAGAAGCTGTCTCGCGAGAAAAATGCCCTTCAATCCAAGCTCTTAAGCTACAGTTATCTTGAGACAGAAAAGCTTCAGCTGGAAGATTTTCAGCGGCGATTGGATGGCATGGAGAAGAGGCAGACAAATTTGCAGAACTTCTTTGAGAAGGCTCTTCAGGATTCTTTTATTGTTGAACTTCTTTCCCGCAAAATCGAATCCATGGATTTGGCAGCTTATAATAAGAAAAGGCGATTGCCTCAGGTTGATCACGTGCAGCCTGTTGCCGAAGGTAGCTTGGTTGACAATCCTAGCAATTTCAGGCTGGAATTTGGGAATGTATTCCCTCAAGATATCTCAAATAAACTCAGACTAGAATTGTCACCAGCTGTCTCAGATATGAACTTGATATCAGGTAGCACACAGGGTTCAAATGAAGATGAGGAAAGCCTGCAGAAAAATCTGTCTGAAGGAGAACAGACAGGAATGCAGACAAGAACTGGCCTTGCTTTTACACCTGAAACACTAGACCTTGCAGATACTGGGGCATCTTTTACTTTTAACATGGATTCGTGTTTATCACAGAGAGCAACAACTACTGAGTGCCCAAATCTTCACTCTCTGGAGCCAAGTACTGAAGAAGGCGATAGTCATATATCCTGCCAACTAAATTTAACTCTGGCATCTTGTACATTGGAATTCAATAGGAATTCATTCTCGGCCAGGTCGCCTCAAATAAACTGTCAGGAAATCGGTAGTTTGGCAGAGTCAAGAGTTAACGCTGATGGTAAAGAATCTGAAATTGGAGTTTCCTCAAACCGAAATGTGGCTAATGAGGCTATCAATCTAGCTCCACCAAAGGAGGCTTCAGGTAACGGCCAAGTCAAAGCAGCTGCTAGGCACGGAGTGAATGATGTGTTTTGGGAAAATTTCCTTACTGAAAGACCAGGCTGTTCAGACAATGAAGAGGCAATATCCAACTATCGAGCAATTCCAAATAGTGAGCAAGAAGAAGGGCGGTCAAATCATGGAATCTCTAGTAACATCAAGAACATGGATAATCTCACCCTTTGA 1464 0.4365 MNSAPQSSSAAATGGSGGGPAPFLQKTYDMVDDSTTDEIVSWSSDNKSFIVWNPPEFSRVLLPTYFKHNNFSSFIRQLNTYGFRKADPERWEFANEEFIKDQKHLLKNIHRRKPIHSHSHPPGSAVDPERAALEQEIEKLSREKNALQSKLLSYSYLETEKLQLEDFQRRLDGMEKRQTNLQNFFEKALQDSFIVELLSRKIESMDLAAYNKKRRLPQVDHVQPVAEGSLVDNPSNFRLEFGNVFPQDISNKLRLELSPAVSDMNLISGSTQGSNEDEESLQKNLSEGEQTGMQTRTGLAFTPETLDLADTGASFTFNMDSCLSQRATTTECPNLHSLEPSTEEGDSHISCQLNLTLASCTLEFNRNSFSARSPQINCQEIGSLAESRVNADGKESEIGVSSNRNVANEAINLAPPKEASGNGQVKAAARHGVNDVFWENFLTERPGCSDNEEAISNYRAIPNSEQEEGRSNHGISSNIKNMDNLTL 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03924 487 FunFam Heat shock transcription factor 1 16 113 - -
Mepo2g03924 487 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 12 265 IPR027725 -
Mepo2g03924 487 MobiDBLite consensus disorder prediction 1 22 - -
Mepo2g03924 487 SMART hsfneu3 19 112 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo2g03924 487 Gene3D - 18 113 IPR036388 -
Mepo2g03924 487 MobiDBLite consensus disorder prediction 460 487 - -
Mepo2g03924 487 SUPERFAMILY "Winged helix" DNA-binding domain 19 112 IPR036390 -
Mepo2g03924 487 Coils Coil 130 150 - -
Mepo2g03924 487 Coils Coil 157 177 - -
Mepo2g03924 487 PRINTS Heat shock factor (HSF) domain signature 74 86 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo2g03924 487 PRINTS Heat shock factor (HSF) domain signature 23 46 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo2g03924 487 PRINTS Heat shock factor (HSF) domain signature 61 73 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo2g03924 487 Pfam HSF-type DNA-binding 23 112 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03924 Mepo-Chr2 48393237 48396696 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03924 1 487 HSF AT4G13980 51.102 1.73e-147 428
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Mepo2g03924 HSF_DNA-bind 1.8e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03924 K09419 - gmx:100786408 706.827