Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03914 ATGCACCAAATCTCATTCATCATCATCGCGATCATCGCCGCCACCGCCGTGATCGCCGACGATGACTCCACCGTCATGCAAAGCCTTCGACAATCCCTTAAACCTTCTCCTAACGGCTGGTCTTCCAATACTTCCTTCTGTCAATGGTCCGGCGTCAAATGCTCATCCGACAACCGCGTCACCAGCATAAACCTCTCCAATCAAAAGCTCTCCGGAACCCTTCCCGATAATCTCAACTCCCTCACTCAACTCACAACTCTCTATTTCCAAAACAACGCTCTCTCCGGTCCTCTTCCTTCTCTCGCCAACCTCTCCTCCCTCACAGACGCCAATCTCGCCAGTAATAACTTCTCCTCCGTAACTCCCGGCGCATTTTCCGGCCTTAATTCACTCCAAACACTCTCCCTCGGAGATAACACCAACCTCTCTCCGTGGACATTCCCTACCGAGTTGACTCAGTCTTCCAACCTCAACTCAATCGATATCAATCAAGCAAAAATCAACGGAACCTTACCAGACATTTTCGGTAGTTTCTCTAGTCTCAACACCCTTCATCTCGCATACAACAATCTCACCGGAGGATTACCTAACTCTCTCGCTGGTTCCGGAATTCAGAGTTTTTGGATCAATAACAATTTACCTGGGTTAACCGGTTCAATCACTGTCATTTCCAACATGACATTGTTAACTCAGGTATGGCTTCATGTGAATAAATTCACCGGTCCAATTCCAGATTTATCGCAATGCAATAGTATAAAAGATCTGCAACTTAGGGATAATCAGTTAACTGGTGTGGTTCCTGATTCTCTGCTGAGCATGTCTAGCCTGCAGAAAGTTACTCTAAGAAATAATCAGCTTCAGGGACCTGTTCCGGTGTTCGGTAAAGATGTGAAATATAATTCTGATGATATCAGTCCTAATAACTTTTGTAATAATAATGCATCTGTACCTTGTGATGCTAGGGTTATGGATTTGCTTCATATTGTTGGAGGTTTTGGGTACCCTATTCAATTCGCAAAGTCATGGACAGGGAATGATCCTTGTAACGGTTGGTTGTGTGTTATATGTGGTGGGGGTAAGATTACGAAGTTGAATTTCGCTAAGCAGGGTTTGCAAGGAACAATTTCCTCTGCTTTTGCCAATTTGACTGATTTGACAGCTTTGTATCTAAATGAGAATAATTTGACTGGTTCTATACCTCAGAATTTAGCTACATTGTCTCAACTTGAGACTCTTGATATCTCTAACAATAATCTATCAGGCGAGGTTCCCAAATTCGCACCAAAGGTCAAGTTTATAACTGATGGTAATGTTTGGCTTGGTAAAAATCTTGGAGGTGGAGCGCCTGGTTCTGCTCCTGGTGGAAGTCCTGCTGGATCGGGAAAAGGTGCTTCGATGAAGGCAGTTTGGATTGCTTTTATAGTGATTGTTGTTGTGGGTTTTGTTGGTCTGGGGTTTTGGGTTTCTTGGAAGTGTTATAAAGGAAGACGGTTTCGGAAATTTGCAAGGGTTGGTAATCCTGAAAATGGGGAAGGAAATGTCAAACTCGATCTTGCTAGTGTTTCAAATGGAAATGGTGGTGCTTCGAGCGAGTTGCAAAGCCAGAGCAGTGGTGATCATAGTGATCTTCACGGTTTTGATGGAGGAAGTGGTGGAAATGCTACAATTTCGATTCATGTTCTTCGGCAAGTGACAAATGATTTCAGCGACGATAACATCTTGGGAAGGGGAGGATTTGGTATTGTTTATAAAGGGGAGTTACCTGATGGAACTAAAATTGCTGTCAAGAGGATGATATCTGTCGCAAGGGGAAGCAAAGGGTTGAACGAGTTCCAAGCAGAGATCGGTGTTCTTACTAAGGTTAGGCATAGACATTTGGTCGCCCTTTTGGGATACTGCATCAATGGCAACGAGAGGCTTTTGGTGTATGAGCATATGCCTCAAGGGACTTTAACGCAGCATCTGTTTGAATGCCGTGAACATGGGTACACTCCTTTGACATGGAAACAAAGGTTGATAATAGCTTTGGATGTTGGACGGGGGGTGGAATACCTGCACAGCTTAGCTCAGCAAAGCTTCATTCATAGAGACTTAAAACCATCAAATATACTATTAGGTGATGACATGAGAGCAAAGGTTGCAGATTTTGGGCTGGTTAAAAACGCACCGGACGGGAATTATTCTGTTGAGACAAAGTTGGCTGGAACATTTGGATATCTTGCACCCGAGTATGCAGCTACTGGAAGAGTGACAACCAAAGTGGACGTTTACGCATTTGGAGTAGTTTTGATGGAACTGATCACAGGTAGAAAGGCTTTAGATGATTCTGCGCCCGATGAAAGTTCTCATTTGGTTACGTGGTTCCGTAGGGTACTGATTAACAAGGAAAGCATTCCAAAGGCAATTGATCAAACTCTCGACCCGGACGAGGAAACAATGTTGAGCATATATAAAGTGGCTGAGCTGGCTGGCCATTGCACCACTCGTTCACCATACCAAAGGCCTGATATGGGGCATGCAGTGAATGTGTTGTGTCCTCTTGTGGAGCAATGGGAACCTGCTACCCACACAGATGAAAGTACTTGTGCGGATGACAATCAGATGAGTCTTACTCAAGCACTACAAAGGTGGCAAGCCAATGAAGGCACTTCAACATTCTTCAATGGCATGTCCTCACATACACAGTCAAGTTCCACATCTAAACCTCCAGTGTTTGCAGATTCCCTTCATTCACCTGATTGCCGGTAG 2748 0.444 MHQISFIIIAIIAATAVIADDDSTVMQSLRQSLKPSPNGWSSNTSFCQWSGVKCSSDNRVTSINLSNQKLSGTLPDNLNSLTQLTTLYFQNNALSGPLPSLANLSSLTDANLASNNFSSVTPGAFSGLNSLQTLSLGDNTNLSPWTFPTELTQSSNLNSIDINQAKINGTLPDIFGSFSSLNTLHLAYNNLTGGLPNSLAGSGIQSFWINNNLPGLTGSITVISNMTLLTQVWLHVNKFTGPIPDLSQCNSIKDLQLRDNQLTGVVPDSLLSMSSLQKVTLRNNQLQGPVPVFGKDVKYNSDDISPNNFCNNNASVPCDARVMDLLHIVGGFGYPIQFAKSWTGNDPCNGWLCVICGGGKITKLNFAKQGLQGTISSAFANLTDLTALYLNENNLTGSIPQNLATLSQLETLDISNNNLSGEVPKFAPKVKFITDGNVWLGKNLGGGAPGSAPGGSPAGSGKGASMKAVWIAFIVIVVVGFVGLGFWVSWKCYKGRRFRKFARVGNPENGEGNVKLDLASVSNGNGGASSELQSQSSGDHSDLHGFDGGSGGNATISIHVLRQVTNDFSDDNILGRGGFGIVYKGELPDGTKIAVKRMISVARGSKGLNEFQAEIGVLTKVRHRHLVALLGYCINGNERLLVYEHMPQGTLTQHLFECREHGYTPLTWKQRLIIALDVGRGVEYLHSLAQQSFIHRDLKPSNILLGDDMRAKVADFGLVKNAPDGNYSVETKLAGTFGYLAPEYAATGRVTTKVDVYAFGVVLMELITGRKALDDSAPDESSHLVTWFRRVLINKESIPKAIDQTLDPDEETMLSIYKVAELAGHCTTRSPYQRPDMGHAVNVLCPLVEQWEPATHTDESTCADDNQMSLTQALQRWQANEGTSTFFNGMSSHTQSSSTSKPPVFADSLHSPDCR 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03914 915 MobiDBLite consensus disorder prediction 524 545 - -
Mepo2g03914 915 FunFam receptor protein kinase TMK1 527 645 - -
Mepo2g03914 915 Pfam Leucine rich repeat 362 419 IPR001611 GO:0005515
Mepo2g03914 915 Pfam Leucine rich repeat N-terminal domain 337 356 IPR013210 -
Mepo2g03914 915 Pfam Leucine rich repeat N-terminal domain 19 55 IPR013210 -
Mepo2g03914 915 PANTHER OSJNBA0070M12.3 PROTEIN 7 915 - -
Mepo2g03914 915 Pfam Protein tyrosine and serine/threonine kinase 572 840 IPR001245 GO:0004672|GO:0006468
Mepo2g03914 915 FunFam Leucine-rich repeat receptor-like kinase 320 443 - -
Mepo2g03914 915 FunFam receptor protein kinase TMK1 646 863 - -
Mepo2g03914 915 Gene3D Transferase(Phosphotransferase) domain 1 646 870 - -
Mepo2g03914 915 ProSitePatterns Serine/Threonine protein kinases active-site signature. 693 705 IPR008271 GO:0004672|GO:0006468
Mepo2g03914 915 SUPERFAMILY Protein kinase-like (PK-like) 556 864 IPR011009 -
Mepo2g03914 915 CDD STKc_IRAK 574 847 - -
Mepo2g03914 915 FunFam Receptor-like kinase TMK4 20 315 - -
Mepo2g03914 915 MobiDBLite consensus disorder prediction 524 541 - -
Mepo2g03914 915 Gene3D Ribonuclease Inhibitor 19 316 IPR032675 -
Mepo2g03914 915 SMART LRR_typ_2 178 201 IPR003591 -
Mepo2g03914 915 SMART LRR_typ_2 406 430 IPR003591 -
Mepo2g03914 915 SMART LRR_typ_2 382 405 IPR003591 -
Mepo2g03914 915 SMART LRR_typ_2 104 127 IPR003591 -
Mepo2g03914 915 SMART serkin_6 568 848 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g03914 915 SUPERFAMILY L domain-like 32 426 - -
Mepo2g03914 915 ProSitePatterns Protein kinases ATP-binding region signature. 574 596 IPR017441 GO:0005524
Mepo2g03914 915 Gene3D Ribonuclease Inhibitor 320 443 IPR032675 -
Mepo2g03914 915 ProSiteProfiles Protein kinase domain profile. 568 848 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g03914 915 Gene3D Phosphorylase Kinase; domain 1 533 645 - -
Mepo2g03914 915 MobiDBLite consensus disorder prediction 885 915 - -
Mepo2g03914 915 MobiDBLite consensus disorder prediction 885 905 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03914 Mepo-Chr2 48321245 48324996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03914 60 844 Receptor kinase-like Gene Family AT5G07280 30.732 9.16e-91 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Mepo2g03914 Pkinase 8.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03914 - - gmx:100286794 1154.81