Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03903 ATGCTATCCTTCAAGTCGTTAGGCTCTCTTCCTTTCAGTTCCAATCCACTTCGTTCTTTTCTGTGTTCATCTTCTTCTTTATCAACCCCAATTAACCAATCTTCGAACGAAGAAACCACTTTCCTGTTTAACCTCCTTAATTCCAATTCCAAATTACATAAATCTGAATCCATCTATGTATCTAAACTTGTTTCAGGAATCACTTCCCCTGAAAAGCCCTTATCTGTGATCAACTTTTTCAAACAAATTGGATTTACTCAAACTCAGATACACTCCATCCTTCGTCAGAGAACTCAAATACTCTTTTCAAAGGTTGATAAAACTCTTAAACCTAAAGTTGAACTCTTTCAACAATTGGGTTTTCAGGGTTCTCAATTAGGTCTTTTTCTTTCTAAGAATCCAAACATTTTGATTGCTAGTTTGAACAAAACATTGGTCCCCTCTGTGGAAGTTATTAAGAAATTTGTACCGAATGAGAAAGATCTTATTCCTGTTTTGTACAGATGTGGCTGGTTAATCCCGCAGTACCGATTATTTGTTGCCAACATTGCTTTCTTAGAGAGTTGTGGCATTGTTGGGAGTCAGGTTTTGATTATACTCAAAGGTTACTCAAGACTTTTAATTGAACCAAAAACTCGTATTAGAAACTATGTTTCCCAAGCTGAAGACTTGGGTTTCCCTCAAAATTCAAGAATGTTGGTTCATGCACTTAATACATTATATTGTTTGAGCCATAACACATTTACAAAAAAGCTTGATTTTATTCAGCGTTTTGGGTTTTCTAAAGATGAGAGCTTGCAAATGTTCAAAAAGGTTCCAGCTTTGCTTAGGTCATCAGAGAAGAAATTAAAGGTTGGAATTGAGTTCTTCTTACATACAGTTATGCTGCCAAAGTCAGCATTGGTTAGTCAGCCTGCGATTTTGATGTATAGCATGGAAGATCGAGTGTTTCCTAGATTTAGAGTTTTTCAGCTTTTGAAATCACAAAATCTATGTCAGAAGGTTCCAAGCTTTGTTACTGCGTTAACTTTTTCTGAGGACAAGTTCTTGGACAGGTTTATATCAAGGTGTAAAGAAAATGCAGAGGCGTTATTGATAGCTTACAAGGGGCATCGTCTAGAAATTTGCGCTATAGAACGAAAGGATGGATATTGA 1155 0.3619 MLSFKSLGSLPFSSNPLRSFLCSSSSLSTPINQSSNEETTFLFNLLNSNSKLHKSESIYVSKLVSGITSPEKPLSVINFFKQIGFTQTQIHSILRQRTQILFSKVDKTLKPKVELFQQLGFQGSQLGLFLSKNPNILIASLNKTLVPSVEVIKKFVPNEKDLIPVLYRCGWLIPQYRLFVANIAFLESCGIVGSQVLIILKGYSRLLIEPKTRIRNYVSQAEDLGFPQNSRMLVHALNTLYCLSHNTFTKKLDFIQRFGFSKDESLQMFKKVPALLRSSEKKLKVGIEFFLHTVMLPKSALVSQPAILMYSMEDRVFPRFRVFQLLKSQNLCQKVPSFVTALTFSEDKFLDRFISRCKENAEALLIAYKGHRLEICAIERKDGY 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03903 384 Gene3D Transcription termination factor 3, mitochondrial 159 363 IPR038538 -
Mepo2g03903 384 SMART mt_12 197 227 IPR003690 GO:0003690|GO:0006355
Mepo2g03903 384 SMART mt_12 127 158 IPR003690 GO:0003690|GO:0006355
Mepo2g03903 384 SMART mt_12 91 122 IPR003690 GO:0003690|GO:0006355
Mepo2g03903 384 SMART mt_12 266 297 IPR003690 GO:0003690|GO:0006355
Mepo2g03903 384 SMART mt_12 231 261 IPR003690 GO:0003690|GO:0006355
Mepo2g03903 384 SMART mt_12 298 329 IPR003690 GO:0003690|GO:0006355
Mepo2g03903 384 PANTHER CGI-12 PROTEIN-RELATED 49 358 IPR003690 GO:0003690|GO:0006355
Mepo2g03903 384 Pfam mTERF 56 207 IPR003690 GO:0003690|GO:0006355
Mepo2g03903 384 Pfam mTERF 180 350 IPR003690 GO:0003690|GO:0006355
Mepo2g03903 384 FunFam Mitochondrial transcription termination factor-like 141 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03903 Mepo-Chr2 48207165 48209942 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mepo2g03903 mTERF 1.2e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03903 K15032 - zju:107425470 303.523