Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03878 ATGACATCTGGTTACGAATATGATATCGATGATCTGTATCAAGAAGCTCAAAGAAGGTGGCTGAAGCCTGCAGAAGTGATGTACATTTTACAGAATCATGAAAAGTATCAGTTCACTCAAGAGCCCCCACAACAGCCAACAAGTGGTTCGCTGTTTCTGTTTAATAGAAGAGTATTGCGTTTCTTCCGGAAAGATGGTCATGCCTGGCGGAAGAAAAGAGATGGAAGAGCTGTAGGAGAAGCCCACGAACGGCTGAAGGTTGGAAATGTTGAAGCCATAAATTGTTACTATGCACATGGAGAGCAGAACCCTACTTTCCAGAGGCGGAGCTATTGGATGTTGAATCCGGAATTTGACCACATTGTTCTCGTTCATTACAGAGACACAAGTGAGGGAAGGCTCAGTTCTGGACCTGGCACACAATTGTCACCGGGTTCTTCTGCGTATAGTCCGAGTCCTAGCTCATATAGTACTCAGAATCCTGGCTCAACGTCCGTTGTTTATGACGCCTATGAACCTAATCAGAGCTTCTCCAGTCCTGGGTCTGCAGAAGTTACCTCTTATAACAATGGAATGAGTTACTCAGAAGGAACAGAAGCAGAATCAGAAACCTCAGCTGACTTTAAGGTTACTCAAGCTTTGCGCCGATTGGAGGTGCAGTTAAGTTTGAATGAGGACAACATTGAAGAAATTGCTCCCTTCTACAATGAGCTTGATGCTGCCCGTGATTCCAAACCACAGAATCATCAAGGGATGATGTGCAAGCAAGAGGAATCTGCAGCTCTCTCTGGACCAGATAACCAGGGGCTATTTTATGATGGATATAATGGAAGGCAAGGTGATAGTGGTGAAAGTTATCATGAATTACTGGACCATGATTTCCCTGATGAAAATGAAAAGACTTTATCATGGAAAAATGTATACATGCCAGCAGGAAATGAGAGTTCACCATCTTCATCATTAAGGGAACCAGTTACGAACCCGGAAAACTATTGCTGGACAAATTTCAACACTGATAATGCTGGAAACTCTGTTTTCTCACTACCTCAAGGTGTTGGTGAAGTCACACTTCCTCCATATTCTTCTTTGGATGAAACACAAGAAAGTCGTTCTAGCTACTATTCGACATTGTTTGACCAAAGCCAAATTGGAGCATCTCATGATGCAGGTTCAAGCTTAACTGTTTCACAAAAACAGAAATTTACTATTAAGGCAGTCTCCCCAGAATGGGGTTATTCCTCTGAGACTACAAAGGTTTTCATTATTGGGTCTTTTCTCAGTCATCCCTCTGATTCTGCCTGGGCCTGTATGCTTGGTGATGTTGAAGTTTCCGTTGAGCTAATTCAGGATGGTGTAATGTGTTGTGAAGTTCCATCTCACATTCCTGGAAAGGTTACTCTGTGCATTACTTCTGGAAACCGGGAGTCATGCAGTGAAGTCAGAGAGTTTGAGTATCGTGATAAGACCAAGAATTTCACCGACCCTGCTCCATTGGAAAGAGAAGCCACCAGAACTCCAGATGAGCTGTTATTACTTGTTAGATTTGGGCAGATGCTCCTTTCTGAGTCATCTGTAAGTAATGATAACAACGAATCGGGAATTTTCATAAAACAGAAGGCTGATGATGATTCATGGAGCCATATTATAGAGGCTCTTCTATTTGGCAGTGAAAATTCTTCTTGCACTATTAACTGGCTTCTTGAAGAGCTACTAAAGGATAAGCTACAGGTGTGGCTTACTTCCAGATCCCGGGAAGTTGATGAAGAGACGGGATGTTCTTTGTCCAAGAAAGAGCAGGGGATCATTCACATGGTTGCTGGGTTGGGTTTTGAGTGGGCCTTGAACCCTATTCTCAGTTGTGGTGTGAACATAAATTTCCGTGATGTCAATGGGTGGACTGCCCTTCATTGGGCTGCACGTTTTGGAAGGGAAAAAATGGTTGCATCACTTATAGCTTCTGGTGCATCTGCTGGAGCAGTGACAGATCCAAGTGCACAAGATCCAATTGGTAAAACTGCGGCATCCATTGCAGCTAGCAGCGGGCATAAGGGACTGGCAGGGTATCTTTCAGAGGTAGCTCTAACAAGCCATCTGTCATCTCTTACACTGGAAGAGAATGAGCTATCTAAAAGTTCTGCGGAGCTTCAAGCAGATTTAACTGTTAGTAATGTCTCCAAGGAAAATATTGCTTTCAGTGAGGATCGGACTTCACTCAAAGATACCTTAGCTGCTGTCAGAAATACAACTCAGGCAGCTGCACGGATACAAGCTGCTTTTCGTTCACATTCATTTAGAAAACGGAGAACAAAAGAAACAAATGGTGTTATGAGTGGACATGATATAAGTGCAAGTAGTGTTGGTGACATGCCAGAGCTTTATGCTATGTCAAAACTTGCCTTTCGAAACTCACGTGAACATAATTCAGCTGCATTATCAATTCAGAAGAAATATCGAGGTTGGAAAGGTCGCAAAGATTTCCTATCATTGCGCCAAAAAGTAGTGAAGATACAGGCTCATGTGAGAGGTTACCAAGTTAGGAAGCATTACAAAGTATTATGGGCAGTTGGAATCTTGGACAAGGTTGTGCTAAGATGGCGGAGAAAAGGAGTCGGTTTACGGGGTTTCAAACCAGAGATGCAGGTTAACGAAAATGAAGATGAAGATATTCTCAAAGTGTTCCGAAAACAGAAAGTAGATGTGGAAATTGAAAAGGCTGTCTCAAGAGTACTGTCCATGGCCAAATCTCCTGATGCTCGTGAGCAATATCATCGCATGCTTGAGAAGTATCGTCAAGCCAAGGCTGAACTTGCACAGACAAGTGAAGAAAAATCGTTAACAACTTCTGTAGAAGATTTTTTAAACATGGATGATGAATTTTATTAA 2883 0.4263 MTSGYEYDIDDLYQEAQRRWLKPAEVMYILQNHEKYQFTQEPPQQPTSGSLFLFNRRVLRFFRKDGHAWRKKRDGRAVGEAHERLKVGNVEAINCYYAHGEQNPTFQRRSYWMLNPEFDHIVLVHYRDTSEGRLSSGPGTQLSPGSSAYSPSPSSYSTQNPGSTSVVYDAYEPNQSFSSPGSAEVTSYNNGMSYSEGTEAESETSADFKVTQALRRLEVQLSLNEDNIEEIAPFYNELDAARDSKPQNHQGMMCKQEESAALSGPDNQGLFYDGYNGRQGDSGESYHELLDHDFPDENEKTLSWKNVYMPAGNESSPSSSLREPVTNPENYCWTNFNTDNAGNSVFSLPQGVGEVTLPPYSSLDETQESRSSYYSTLFDQSQIGASHDAGSSLTVSQKQKFTIKAVSPEWGYSSETTKVFIIGSFLSHPSDSAWACMLGDVEVSVELIQDGVMCCEVPSHIPGKVTLCITSGNRESCSEVREFEYRDKTKNFTDPAPLEREATRTPDELLLLVRFGQMLLSESSVSNDNNESGIFIKQKADDDSWSHIIEALLFGSENSSCTINWLLEELLKDKLQVWLTSRSREVDEETGCSLSKKEQGIIHMVAGLGFEWALNPILSCGVNINFRDVNGWTALHWAARFGREKMVASLIASGASAGAVTDPSAQDPIGKTAASIAASSGHKGLAGYLSEVALTSHLSSLTLEENELSKSSAELQADLTVSNVSKENIAFSEDRTSLKDTLAAVRNTTQAAARIQAAFRSHSFRKRRTKETNGVMSGHDISASSVGDMPELYAMSKLAFRNSREHNSAALSIQKKYRGWKGRKDFLSLRQKVVKIQAHVRGYQVRKHYKVLWAVGILDKVVLRWRRKGVGLRGFKPEMQVNENEDEDILKVFRKQKVDVEIEKAVSRVLSMAKSPDAREQYHRMLEKYRQAKAELAQTSEEKSLTTSVEDFLNMDDEFY 960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03878 960 ProSiteProfiles IQ motif profile. 748 777 IPR000048 GO:0005515
Mepo2g03878 960 SUPERFAMILY E set domains 402 486 IPR014756 -
Mepo2g03878 960 ProSiteProfiles IQ motif profile. 806 835 IPR000048 GO:0005515
Mepo2g03878 960 Coils Coil 919 942 - -
Mepo2g03878 960 CDD IPT 402 487 - -
Mepo2g03878 960 SMART ANK_2a 630 659 IPR002110 GO:0005515
Mepo2g03878 960 SMART ANK_2a 669 698 IPR002110 GO:0005515
Mepo2g03878 960 SMART ANK_2a 873 902 IPR002110 GO:0005515
Mepo2g03878 960 ProSiteProfiles IQ motif profile. 829 854 IPR000048 GO:0005515
Mepo2g03878 960 MobiDBLite consensus disorder prediction 244 272 - -
Mepo2g03878 960 SMART CG_1_2 12 130 IPR005559 GO:0003677
Mepo2g03878 960 Gene3D - 509 695 IPR036770 -
Mepo2g03878 960 ProSiteProfiles Ankyrin repeat profile. 630 662 IPR002110 GO:0005515
Mepo2g03878 960 Pfam IPT/TIG domain 402 485 IPR002909 -
Mepo2g03878 960 MobiDBLite consensus disorder prediction 130 205 - -
Mepo2g03878 960 Gene3D Immunoglobulins 395 490 IPR013783 -
Mepo2g03878 960 Pfam Ankyrin repeats (3 copies) 612 690 IPR002110 GO:0005515
Mepo2g03878 960 FunFam Calmodulin-binding transcription activator 4 isoform A 513 695 - -
Mepo2g03878 960 ProSiteProfiles CG-1 DNA-binding domain profile. 9 135 IPR005559 GO:0003677
Mepo2g03878 960 Gene3D - 805 854 - -
Mepo2g03878 960 SUPERFAMILY Ankyrin repeat 598 691 IPR036770 -
Mepo2g03878 960 MobiDBLite consensus disorder prediction 133 205 - -
Mepo2g03878 960 Pfam IQ calmodulin-binding motif 831 850 IPR000048 GO:0005515
Mepo2g03878 960 Pfam IQ calmodulin-binding motif 808 826 IPR000048 GO:0005515
Mepo2g03878 960 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 8 935 - -
Mepo2g03878 960 Pfam CG-1 domain 15 128 IPR005559 GO:0003677
Mepo2g03878 960 FunFam Calmodulin-binding transcription activator 2 805 853 - -
Mepo2g03878 960 ProSiteProfiles Ankyrin repeat region circular profile. 630 656 - -
Mepo2g03878 960 SMART iq_5 747 769 IPR000048 GO:0005515
Mepo2g03878 960 SMART iq_5 805 827 IPR000048 GO:0005515
Mepo2g03878 960 SMART iq_5 828 850 IPR000048 GO:0005515
Mepo2g03878 960 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 795 853 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03878 Mepo-Chr2 48004064 48012812 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03878 3 939 CAMTA Transcription Factor Family AT1G67310 52.227 0.0 893
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Mepo2g03878 CG-1 9.4e-49 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03878 K21596 - gmx:100786880 1420.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g03878 2 48004064 48012812 Mepo2g03878 2 48004064 48012812 ECH
Mepo3g06201 3 76175473 76185034 Mepo2g03878 2 48004064 48012812 PCT