Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03876 ATGTGGCTGAAATGGTGGGAGAAGATTTTAGGGAATGGTTACAAAATCAATCAACAGTACTATCAGTATATTGGGTCAAAGAGAGTGAAGAGAGAGTTATGGAGAAAGCTTTTGTTGTCATGGGTATTGGGTTGGACTGTAGTGTCTTTGTGGATCTTCTGCTTTATGAGTTTACAAGCTACTGAGAAGAGGAAAGAAACTCTTGCAAGCATGTGTGATGAAAGAGCTAGGATTGTTCAGGATCAGTTTAATGTTAGTATGAACCATATTCAAGCTATGTCTATTTTGATCTCAACTTTTCATCATGCCAAGAGTCCCTCAGCCATTGATCAGAGAACTTTTGCTAGCTACACAGAAAGAACAGCTTTTGAGAGGCCTCTAACAAGTGGTGTGGCATATGCTGTAAGAGTGCTTCATTATGAAAGGGAACAATTTGAGAAGCAACAAGGTTGGATTATTAAGAGAATGGATACTCTAGAGCAGAATCCAGTTCATAAGGACAATTATGCCGTAGAGGAATTGGAGCCATCTCCTCTTCAGGAAGAATATGCTCCTGTCATATTTGCACAAGATACAATTTCACATGTCATTTCTGTTGATATGCTTTCTGGAAAGGAAGACCGTGATAATGTGTTGCGTGCAAGAGAATCGGGCAAAGGGGTTTTAACTGCACCCTTCAGGCTTCTCAAATCAAATCGGTTAGGTGTTATCCTTACGTTTGCCGTCTACAAGAGATATCTTCCATCAAACGCAACCCCAAATGAAAGGATTCAAGCAACTAATGGGTATCTTGGTGGGGTATTTGATGTTGAGTCATTAGTGGAGAAATTACTTGAGCAACTTGCTAGCAAGCAAAGTGTAATTGTTAATGTATATGACACTACAAATCATACTCATCCAATTGCCATGTATGGCTCAAATATATCAGGCGATGTGTTCAATCATGTCAGCACTCTTAACTTTGGTGACCCTTTCAGGAAACATGAGATGCATTGCAGGTTCAAACAGAAACCGCCTTTGCCATCGGCTGCAATATTAACTTCAATTGGCATTCTTGTTATTGCTCTCCTTGTTGGACATATTTTCTATGCCACCGTGAATCGAATTGCAAATGTAGAAGATGATTACCATGAAATGATGGAGCTTAAAAAACGTGCGGAGGCAGCAGATGTTGCAAAATCCCAGTTTCTTGCCACTGTTTCCCATGAAATCAGAACACCGATGAATGGTGTTTTAGGGATGATGCATATGCTTATGGACACAGATTTAGATGTAACTCAACAGGAATATGTAAGAACAGCACAGGAAAGTGGAAAAGCTCTAGTATCACTTATAAATGAGGTTTTGGATCAGGCAAAGATTGAATTTGGTAAGCTAGAGCTTGAGGCAGTGCTTTTTGACATACGATCGATTTTGGATGATGTATTGTCACTATTTTCCGATAAGTCCCAAGGAAAAGGAGTTGAGTTGGCAGCTTATGTGTCAGATCAAGTTCCTAAACTGCTAATAGGTGATCCTGGAAGGTTTCGGCAAATAATTACTAATCTCATGGGCAACTCAATTAAGTTCACAGACAAAGGACACATTTTTGTGACTATCCATCTTGTTGAGGAGATTGTTCATTCTATAGAGGTTGACAATGAATCAAATCCAGAAAATACATTGAGTGGTTTTCCCGTTGTGAAAAGTTGCCTGAGTTGGAAAGGATTCAAGGCTTTCAGTCAAGAGGGACCACTTGGTTCTTTCTCTTCCACCTCTAGCGATCTTATAAATTTGATTGTATCTGTTGAAGATACAGGTGACGGTATTCCTAGAGAATCGCAACCTCTCATCTTCACTCCATTCATGCAAGTAGGTTCGTCGATCTCCCGAAAACATGGAGGAACTGGTATTGGACTAAGCATTAGCAAGTGTTTGGTTGGCCTCATGAATGGTGAAATTGGATTTGCAAGTGAACCAAAAACTGGTTCCACTTTCACTTTTACTGCTGTCTTTGCCAATGGACTCCTTAGTTCTAATGAGTGTAAAATACTGCAAATCAACGACCAATCTAAACCTGCATCTTCAGAATTTGAGGGTATGAATGCATTGGTTATTGATCCAAGACCTATTAGAGCAAAAGTGTCTCAATATCACATCCAACGCCTTGGCATTCACGTTGAAAAGGTTTCAGATTTGAACCAAGGGTTGTCAACCATAAACAAAGGGAATGCAGTTACCAACATGGTCTTGATTGAGCAGGAAGTTTGGTATAGAGATTCAAGCATGTCATCTCATTTTTTCGATAGCACAAGGAAAGTCAACTGCTGTTTTCCTCCAAAGTTGTTCATTCTTGTTAATTCTAGTAACTCTTCTAAAACTAGCAGTTTAACGTCAGATGTTCATAATCCTACTATCATTACAAAACCACTCAGGGCAAGCATGCTTGCTGCGTCACTACAACGAGAGATGAATTTTAGGAACAAGAGAACTCTAAATAGGGACCTCCAAAATTTGTCTCTTAGCCATCTTCTTGTTGGGAGGAAAATTCTAATTGTTGATGATAATGGCGTGAATCGGGCAGTAGCAGCTGGTGCTTTGAAAAAGTACGGAGCAGATGTGGTTTGTGTTAGTAGTGGAAAAGATGCTATCACTTCGCTGAAGCCCCCGCATCAGTTCGACGCTTGTTTCATGGATATTCAAATGCCAGAAATGGATGGTTTTGAAGCTACAGGTAGAATCAGAGAGATGGAACAGAATGTAAACACGGAAGTATCTATAAACTGGCATGTGCCAATTTTAGCGATGACTGCAGATGTAATTCAGGCTACACATGAGAAATGCCTGAGGTGTGGAATGGATGGATATGTTTCAAAACCATTTGAAGCCGAACAACTTTATCGGGAAGTTTCTCGGTTTTTCCTGTCATCTTGA 2913 0.3999 MWLKWWEKILGNGYKINQQYYQYIGSKRVKRELWRKLLLSWVLGWTVVSLWIFCFMSLQATEKRKETLASMCDERARIVQDQFNVSMNHIQAMSILISTFHHAKSPSAIDQRTFASYTERTAFERPLTSGVAYAVRVLHYEREQFEKQQGWIIKRMDTLEQNPVHKDNYAVEELEPSPLQEEYAPVIFAQDTISHVISVDMLSGKEDRDNVLRARESGKGVLTAPFRLLKSNRLGVILTFAVYKRYLPSNATPNERIQATNGYLGGVFDVESLVEKLLEQLASKQSVIVNVYDTTNHTHPIAMYGSNISGDVFNHVSTLNFGDPFRKHEMHCRFKQKPPLPSAAILTSIGILVIALLVGHIFYATVNRIANVEDDYHEMMELKKRAEAADVAKSQFLATVSHEIRTPMNGVLGMMHMLMDTDLDVTQQEYVRTAQESGKALVSLINEVLDQAKIEFGKLELEAVLFDIRSILDDVLSLFSDKSQGKGVELAAYVSDQVPKLLIGDPGRFRQIITNLMGNSIKFTDKGHIFVTIHLVEEIVHSIEVDNESNPENTLSGFPVVKSCLSWKGFKAFSQEGPLGSFSSTSSDLINLIVSVEDTGDGIPRESQPLIFTPFMQVGSSISRKHGGTGIGLSISKCLVGLMNGEIGFASEPKTGSTFTFTAVFANGLLSSNECKILQINDQSKPASSEFEGMNALVIDPRPIRAKVSQYHIQRLGIHVEKVSDLNQGLSTINKGNAVTNMVLIEQEVWYRDSSMSSHFFDSTRKVNCCFPPKLFILVNSSNSSKTSSLTSDVHNPTIITKPLRASMLAASLQREMNFRNKRTLNRDLQNLSLSHLLVGRKILIVDDNGVNRAVAAGALKKYGADVVCVSSGKDAITSLKPPHQFDACFMDIQMPEMDGFEATGRIREMEQNVNTEVSINWHVPILAMTADVIQATHEKCLRCGMDGYVSKPFEAEQLYREVSRFFLSS 970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03876 970 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 446 662 IPR036890 -
Mepo2g03876 970 FunFam Histidine kinase 4 364 455 - -
Mepo2g03876 970 CDD REC_hyHK_CKI1_RcsC-like 843 963 - -
Mepo2g03876 970 SUPERFAMILY CheY-like 691 818 IPR011006 -
Mepo2g03876 970 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 377 458 IPR036097 GO:0000155|GO:0007165
Mepo2g03876 970 SMART HisKA_10 392 457 IPR003661 GO:0000155|GO:0007165
Mepo2g03876 970 ProSiteProfiles Histidine kinase domain profile. 399 667 IPR005467 -
Mepo2g03876 970 Pfam Response regulator receiver domain 843 962 IPR001789 GO:0000160
Mepo2g03876 970 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 504 665 IPR003594 -
Mepo2g03876 970 Pfam CHASE domain 108 304 IPR006189 -
Mepo2g03876 970 Gene3D - 56 108 - -
Mepo2g03876 970 CDD HATPase_EvgS-ArcB-TorS-like 509 665 - -
Mepo2g03876 970 SMART REC_2 841 963 IPR001789 GO:0000160
Mepo2g03876 970 Gene3D CHASE domain 109 338 IPR042240 -
Mepo2g03876 970 ProSiteProfiles CHASE domain profile. 105 331 IPR006189 -
Mepo2g03876 970 Gene3D - 456 667 IPR036890 -
Mepo2g03876 970 Gene3D - 361 455 - -
Mepo2g03876 970 FunFam Histidine kinase 4 109 338 - -
Mepo2g03876 970 PRINTS Bacterial sensor protein C-terminal signature 610 620 IPR004358 GO:0016310|GO:0016772
Mepo2g03876 970 PRINTS Bacterial sensor protein C-terminal signature 627 645 IPR004358 GO:0016310|GO:0016772
Mepo2g03876 970 PRINTS Bacterial sensor protein C-terminal signature 651 664 IPR004358 GO:0016310|GO:0016772
Mepo2g03876 970 PRINTS Bacterial sensor protein C-terminal signature 592 606 IPR004358 GO:0016310|GO:0016772
Mepo2g03876 970 CDD HisKA 392 453 IPR003661 GO:0000155|GO:0007165
Mepo2g03876 970 Gene3D - 837 969 - -
Mepo2g03876 970 ProSiteProfiles Response regulatory domain profile. 695 817 IPR001789 GO:0000160
Mepo2g03876 970 ProSiteProfiles Response regulatory domain profile. 842 967 IPR001789 GO:0000160
Mepo2g03876 970 PANTHER TWO-COMPONENT HISTIDINE KINASE 70 960 - -
Mepo2g03876 970 SMART HKATPase_4 504 667 IPR003594 -
Mepo2g03876 970 Coils Coil 369 389 - -
Mepo2g03876 970 Pfam His Kinase A (phospho-acceptor) domain 392 455 IPR003661 GO:0000155|GO:0007165
Mepo2g03876 970 SMART CHASE_2 105 306 IPR006189 -
Mepo2g03876 970 SUPERFAMILY CheY-like 840 965 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03876 Mepo-Chr2 47995020 48001131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03876 1 967 Miscellaneous Gene Families AT1G27320 68.367 0.0 1342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mepo2g03876 CHASE 1.7e-36 CL0165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03876 K14489 - gmx:100801546 1622.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g03876 2 47995020 48001131 Mepo2g03876 2 47995020 48001131 ECH