Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03844 ATGCAGTTTGATTCCGATTCAGATTCCGACGGATCTCACATTTCTTCAACTCCACCAAGACAACAACCAAATTCACCACCACCACCAACAAAACCACCTCTTTCAGTTTCAAACAAAAAATCGAAATCCAAAACCAAACCCTCAAAATCGAATAAACCCCTTTCTAAACCCCCCGAAATTGTTCCCGAACAAGAATCTTTCCCCTTCCCTTCCATCCCCTCACTTCCTTTCAACATCCGACAACGAACCTCCGACGCTCCTTCAACTTCATCTTCTCACTCTATCGAAACCCTCCCCGCCGGCTTCTTCTCCAAATCAATTTCCTTCTCCAAAATTCGTAAACCCTTACTCAATCTAGAAACTTCCGAAGCTGAACCGGTTGTTGATTCTGCTAAAACTGTTGCGAAATCTGTGAAGAAACATCCGAATTTGATAGGTGCTAGTGTGGTAACGCCGATAGTAAAGGCACTAAAAGGCGCTGGAGAAGGAAACTTTGTGAAATTGAATTTGAATGGGAAGAGGAAAAAGTTTTTGAATAAAGGGTGGAAGAAAAATGGAAAATTTGGTAGTGGTAAAAGGTATTTTAGAAATAGTAATAGTAGCAATAGTGGTAGAAGTAGTAGAAGTAAACGTATAAAATCGGAACACAAAGAAGGAGATGATGATGAGCAGGAGGAGGATGGTATGGGTGTTGAGAATGCAAAACAACAGGAAAAGAAGAATGGTTGGGAAAATGAATGCAAAATGTTGGAGGAGGCTGTGTTAGCAGCAAGAGATGAAGCTTCTGATGAGAATTTGGTGAGGTTGTTGAAATTGATTCATGGTTTTGAGTCTTTTCGAGAGGGGCAGCTTGAGGCGATTAAGCATGTGCTTGCTGGGAAATCGACGATGCTTATTTTGCCGACGGGTGCTGGGAAGTCGTTGTGTTATCAGTTGAGTGCGTTGATTTTGCCTGGGATTACGCTTGTTGTTAGTCCTTTGGTAGCTTTGATGATTGATCAGCTTCGACAATTGCCTCCGCTCATTTCGGGCGCTCTTCTAAGCAGTGCTCAGACATTTGAAGAATCCTCTGAAACGCTCAACCAGCTTCGTCAAGGCACAATAAAGGTGCTTTTTGTTTCACCAGAGCGATTCTTGAATGAAGAATTTCTGTCTGTTATCTCTAGTGGGTTAGCTGTATCACTTCTTGTTATTGATGAAGCACACTGTATATCTGAATGGTCTCACAATTTCCGACCTTCGTTCATGAGACTTAGAGCATCACTACTTCATAAGAGTCTTAATGTAGGTTCTATTCTTGCAATGACAGCAACTGCCACAACCACGACTTTAGATGCCATTATGTCTGCGCTGGATATTCCTCGCACAAATCTTATTCAGAATGCACACTTAAGGGACAATTTGCTTTTTCTAAACGTATACATCAATTATAGAATGAAAGACCTACTGGTGCTTATGAAGTCTTCTCCTTTTGCGGAAGTTAAAAGCATCATAGTATACTGCAAATTTCAGTCTGAAACTGATCAAATCAGCAGATATTTGAATGATAACAATATCAAGGCAAAGAGTTATCATAGTGGTATTTCTGCAAAGGAACGTGGCTACGTACAGGAGTTGTTTGGTTCAAACAAGATCAGAGTGGTTGTTGCAACTGTGGCATTTGGCATGGGACTAGATAAAAGAGACGTTGGAGCAGTAATTCATTACAGTTTACCTGGAAGTCTGGAAGAGTATGTACAGGAGATAGGACGTGCTGGAAGGGATGGGAGGTTGTCCTATTGTCACCTATTTTATGATGATGAGATGTATTTCAAACTTCGTAGTCTAATGTACAGTGAAGGAATAGATGAATATGCAGTGAATAAATTTCTGTCTGAAGTGTTTCCTGCTGACAAAAGCTCCTGTGGGAAAATATGTTCGTTAATCAAAGAATCTGCTTCACGCAGGTTTGATATGAAAGAAGAGGTGATTCTCACAGTTTTGACACGCTTGGAGCTGGGTGACGTGCAGTACTTACATTTACTTCCACAGACAAATGCAACGTGTGTTCTGAATTTTCATATGACTCCGGCTGTGTCCCTTGCCCAAAAGGTTTCTGCTATTGCTGTAATTCTGAAAAGATCTGAAAATAAGCACGGACAATATACTTTTGATATTCCAACTGTGGCAAATGACATGGGGGTCACACCAGTTGAATTAACAAATCAGTTGTATGACCTAAAGTTGAAGGGAGAAATTACTTATGAAATGAAGGACATGGCCTACTGTTATAGGATTCTTGAAGTCCCAACAGACTTTTTTTCTCTATCAGCAGATATTACACGATGGTTATCGGAAGTTGAAAGTTGTAAGGTACGAAAAATGGATGCAATGTTTAATGCTGCATATTTTGCAGTAAATCTATGTGATAAGATGAACGGTTGCAGTAGTTCTAATCACACTTCATGCTTGCAAAGGATAATATTGGATTACTTTGCTGGAGTTGATAATGCTGATTTCTGCAAGAAAATCGATCAAAGCAGTCGTTTCCTGCGGGCAGATATAAAGGTTTTTCTACAGAGCAATTCACATGCTCGCTTTACACCAAGAGCTGTTGCGAGGGTAATGCATGGAATTGCAAGCCCAGCCTACCCTTATGCAATATGGGGTAAAACCCATTTCTGGGGAAGGTATACCAAGATAGACTTTAATGTGGTGATGGAAGCAGCAAAGGAAGAACTTAAAAAATTCATCGGAAAAGATCTACTCTAG 2751 0.4046 MQFDSDSDSDGSHISSTPPRQQPNSPPPPTKPPLSVSNKKSKSKTKPSKSNKPLSKPPEIVPEQESFPFPSIPSLPFNIRQRTSDAPSTSSSHSIETLPAGFFSKSISFSKIRKPLLNLETSEAEPVVDSAKTVAKSVKKHPNLIGASVVTPIVKALKGAGEGNFVKLNLNGKRKKFLNKGWKKNGKFGSGKRYFRNSNSSNSGRSSRSKRIKSEHKEGDDDEQEEDGMGVENAKQQEKKNGWENECKMLEEAVLAARDEASDENLVRLLKLIHGFESFREGQLEAIKHVLAGKSTMLILPTGAGKSLCYQLSALILPGITLVVSPLVALMIDQLRQLPPLISGALLSSAQTFEESSETLNQLRQGTIKVLFVSPERFLNEEFLSVISSGLAVSLLVIDEAHCISEWSHNFRPSFMRLRASLLHKSLNVGSILAMTATATTTTLDAIMSALDIPRTNLIQNAHLRDNLLFLNVYINYRMKDLLVLMKSSPFAEVKSIIVYCKFQSETDQISRYLNDNNIKAKSYHSGISAKERGYVQELFGSNKIRVVVATVAFGMGLDKRDVGAVIHYSLPGSLEEYVQEIGRAGRDGRLSYCHLFYDDEMYFKLRSLMYSEGIDEYAVNKFLSEVFPADKSSCGKICSLIKESASRRFDMKEEVILTVLTRLELGDVQYLHLLPQTNATCVLNFHMTPAVSLAQKVSAIAVILKRSENKHGQYTFDIPTVANDMGVTPVELTNQLYDLKLKGEITYEMKDMAYCYRILEVPTDFFSLSADITRWLSEVESCKVRKMDAMFNAAYFAVNLCDKMNGCSSSNHTSCLQRIILDYFAGVDNADFCKKIDQSSRFLRADIKVFLQSNSHARFTPRAVARVMHGIASPAYPYAIWGKTHFWGRYTKIDFNVVMEAAKEELKKFIGKDLL 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03844 916 PANTHER DNA HELICASE RECQ FAMILY MEMBER 255 792 - -
Mepo2g03844 916 Coils Coil 233 260 - -
Mepo2g03844 916 CDD SF2_C_RecQ 465 598 - -
Mepo2g03844 916 SMART ultradead3 275 474 IPR014001 -
Mepo2g03844 916 MobiDBLite consensus disorder prediction 192 207 - -
Mepo2g03844 916 NCBIfam RecQ family ATP-dependent DNA helicase 269 616 IPR004589 GO:0004386|GO:0006310
Mepo2g03844 916 Pfam Helicase conserved C-terminal domain 493 588 IPR001650 -
Mepo2g03844 916 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 319 601 IPR027417 -
Mepo2g03844 916 Gene3D - 250 457 IPR027417 -
Mepo2g03844 916 MobiDBLite consensus disorder prediction 1 19 - -
Mepo2g03844 916 CDD DEXHc_RecQ4-like 267 464 - -
Mepo2g03844 916 FunFam ATP-dependent DNA helicase Q4 247 457 - -
Mepo2g03844 916 Gene3D - 465 656 IPR027417 -
Mepo2g03844 916 Pfam DEAD/DEAH box helicase 282 443 IPR011545 GO:0003676|GO:0005524
Mepo2g03844 916 MobiDBLite consensus disorder prediction 229 243 - -
Mepo2g03844 916 ProSitePatterns DEAH-box subfamily ATP-dependent helicases signature. 394 403 IPR002464 -
Mepo2g03844 916 FunFam ATP-dependent DNA helicase Q-like 5 465 656 - -
Mepo2g03844 916 MobiDBLite consensus disorder prediction 1 95 - -
Mepo2g03844 916 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 287 457 IPR014001 -
Mepo2g03844 916 Coils Coil 913 916 - -
Mepo2g03844 916 MobiDBLite consensus disorder prediction 20 34 - -
Mepo2g03844 916 MobiDBLite consensus disorder prediction 181 243 - -
Mepo2g03844 916 SMART helicmild6 508 589 IPR001650 -
Mepo2g03844 916 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 478 628 IPR001650 -
Mepo2g03844 916 MobiDBLite consensus disorder prediction 76 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03844 Mepo-Chr2 47649952 47657352 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03844 494 621 Eukaryotic Initiation Factors Gene Family AT3G19760 30.769 4.82e-13 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03844 K10730 - gmx:100811214 1181.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g03844 2 47649952 47657352 Mepo2g03844 2 47649952 47657352 ECH