Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03838 ATGTTGTTAGTGATGTGTTTCAATGCATTTCCTAATGTATGTGTAAGGGAACAAAGTGAAATAGAACAAAGGTTACTTCAGAAAGAGTTTGAATCTTCTAGTTTTGAAGATGAAGAGGCTTTTGCAAAAGCTGGTGTGTGGAGCAAACTTACATTTAGGTGGTTGAATCCTATATTTGAAATGGGTCGGATTCAGAAGCTTGAACATGTTAATGTTCCTTCTGTTCCTCACTCTGAAACTGCTGCTAGTGCTTCTTCTATGTTGGAAGAATCTATTCGAAAACAGAAGCTTGAAGGTGGTTCTTTGTCAAAAGCTATTGTTCATTCTGTTTGGAAATCATTGGCCTTAAACGCTGTTTTAGCAGGTGTTAACACTATTGCTGCTTATATTGGTCCCTTATTGATATCAAACTTTGTGAATTTTTTACTGTCTAATGATGATAATTCAAACATCAAATATGGATTGATTCTTGCCTTCATTTTCTTCCTCGCAAAAACTGTTGAGTCACTAAGTCAAAGACAATGGTACTTTGGTGCTCAACGAATTGGAATTCAGGTGCGTGCAGCACTTATGGCCTTAGTTTATAGCAAGTCACTAATGATTAAATGTGGCGGACCGACGCATGGTAAAATCATCAATTTGATTAATGTGGATGTTGAAAGAATTGGTGATTTTTGCTGGTATGTTCATGGAGTTTGGTTGCTTCCAGTTCAGATTATTTTGGCCTTGGTGATCTTATACATAAATTTGGGTTGCACGCCTTCTATTGCTGCACTTGCTGTTACCATTTTGGTCATGGTGTGTAACACACCTTTGGCCAATATGCAAGAAGGTTTGCACTCTAAGATAATGGAAGCTAAAGATTCAAGAATCAAAATGACTTCAGAGACAATGAAGAACATTAGAATTTTAAAGTTGCATTCATGGGAATCTACATTTCTGCAGAAACTCTTACAACTTAGGGACACAGAAAAGAAGTGGTTGCACAAATACCTCTACTTATGCTCAGCAGTAGCCACTCTATTTTGGGCATCTCCAACTTTGGTTTCTGTTTTCACTTTTGGAGCTTGTATATTGGTGAAAACCGAGCTAACTGCAGCCACGGTCCTCTCGGCTCTTGCTACATTTCGTATTTTGCAAGAACCGATTTACAATTTGCCTGAACTTATTTCCATGATAACTCAAACAAAAGTCTCTGTCGATCGAATCCAAGAGTTCATAAAGGAAGAAGATCAAAACCAATTCATGAATAGGCATGCTTCCAAAACTTCAACAACTGCTATTGAAATAAAGCCAGGAGAATATGCATGGGAAGCAAACGATCAATTCCTGAAGAAACCAACGATTCATATTGCAGAAAAATTGATTATAAAGAAAGGTCAAAAGGTGGCAGTTTGTGGGCCAGTGGGTTCTGGAAAATCAAGCTTGCTTTGTAGTATGCTTGGTGAGATTTCATTGGTTTCTGGGGCAGCAACCAAAGTTTATGGGACTAGAAGTTATGTACCCCAAAGTCCATGGATTCAGTCTGGTACTATAAGGGAAAATATATTGTTTGGGAAGCAAATGAACAAGGACTTATTTGAAAATGTTGTGGATGGTTGCGCATTGCTCCAGGATATCAACTTATGGAGTGATGGAGATTTGACCATGGTGGAGGAGAGGGGAATAAATTTAAGTGGAGGACAAAAGCAGCGAATTCAATTGGCAAGGGCTGTTTACAATGACTCGGATATTTATTTCCTCGATGACCCTTTTAGTGCGGTTGATGCTCATACTGGGAGTCATATGTTTAAGGAATGTCTAATGAAACTTCTATACGATAAAACTGTTGTTTATGCTACACATCAACTGGAATTCTTGGAAGCTGCAGATCTTATTTTGGTTATGAAAGATGGCAAAATAGTGGAGTCTGGAAGGTATAGAGATCTCATAGCATGCCCTCATAGTGAATTTGTCCAGCAAATGGCTGCTCATGAAGAAACAGTATGCCAAATTCCATGCCGGAAAGATGATTCTGTTTGCTGCAGACCCTGCCAAAAAAATCCAACTGAAATTGCAGAAGAAAATATTCAAGAGATCATGTTGGATTGGAAGAGAACCAGAGAAGAGGAAGCAATGACTGGTCGAGTAAAATGGAGTGTTTACTCAACCTTTGTCACATTAGCTTATAAAGGAGCACTGGTTCCAGTTATTCTTCTCTGCCAAATTCTCTTTCAAGTTATGCAAATGGGAAGCAATTATTGGATGTCGTGGGCTACAGAAAAAAAGGGAAGGGTCGACAATGTGCAGCTTATGGGAGTTTTCGCTCTTTTGTCTGGTGGAAGCTCCATCTTCATATTGGGAAGAACTGTTTTAATGGCAACAGTTGCCGTGGAAACTGCTCAGCGCCTTTTTCATGGAATGATCACATCGGTTTTTAGGGCACCTGTGTCATTTTTTGATACCACTCCTTCTAGCCGAATTCTGAGTAGGTCATCCACGGATCAAAGTACAGTTGATACAGACATACCCTACAGATTAGCTGGACTGGTCTTTGCACTGATCCAGTTATTAAGTATCATTGTCCTTATGTCCCAGGCTGCATGGCAAGTCATTCTTCTCTTTTTTGTGGTTCTTGCTCTCTCTGTCTGGTATCAGGCCTATTACATCACTACGGCTAGGGAATTGGCCAGGATGGTGGGGATCCGAAAGGCACCAATCTTGCATCACTTCTCAGAATCAATTGCTGGGGCTGCCACAATCCGTTGTTTCAAACAAGAGAAAATATTCTTGACCAAGGTTATGGCTCTAATTGACGATTACTCTCGGGTAGCCTTTCACAACTATGCCACCATGGAATGGTTGTCTGTCAGAATCAATTTTCTCTTCAATCTGGTATTCTATTTTGTTCTCGTTATCTTGGTTACTTTGCCAAGGTCTGCCATCAATCCCAGCTTGGCAGGTCTTGTTGCTACTTATGGTCTAAACTTGAATGTGCTTCAGGCTTGGGTGATATGGAATCTATGCAATGTTGAGAACAAAATGATCTCAGTAGAGAGAATATTGCAATTCTCTAATATACCAAGCGAAGCACCATTAATTATTCAAGATTGCAGACCTGAACCAGAGTGGCCTAAGGAAGGAAAAATTGAATTCCTTAACCTTCATATACAATATGATCCTTCGGGTCCTATGGTTCTCAAAGGTGTCACTTGCGTCTTCCCAGGACAGAAGAAAATTGCAGTGGTAGGCCGGACAGGGAGTGGAAAATCTACTCTGGTGCAAGCCCTCTTTCGAGTTGTGGAGCCTTTGGAAGGATGTATACTTATCGATGGTGTACATATTTCCAAGATTGGTTTGCAAGATTTAAGATCTAAGCTTGGTATCATTCCTCAGGATCCAACCTTGTTTTTAGGTACTGTAAGGACTAACTTGGATCCGTTGGAACAACACACTGATCAAGACCTTTGGGAGGTTCTCAGGAAGTGCCATCTTGCGGAAATAGTACAGGAAGATCCAAGGCTTCTTGATGCACCAGTGGCCGAAAATGGAGAAAATTGGAGTGTTGGACAGAGACAACTGGTTTGCCTTGCTAGGCTGCTACTGAAGAAAAGAAAAATTTTGGTCTTAGACGAGGCAACTGCATCCATCGACACCGCAACTGATAATTTAATTCAGAAGACTATCAGGGAGGAAACAAGCGGATGCACAGTCATCACAGTAGCACATAGAATTCCTACCGTCATTGACAGTGATTTGGTTTTGGTGCTTAATGAAGGGACAATTGCAGAGTATGATCAACCATCTCAATTGCTACAAGACAATTCTTCTTCCTTCTCAAAGTTGGTGTCAGAATTTTTGAGAAGATCGTCCCAAAGTAATTGCAAAAAAAGATAA 3876 0.4025 MLLVMCFNAFPNVCVREQSEIEQRLLQKEFESSSFEDEEAFAKAGVWSKLTFRWLNPIFEMGRIQKLEHVNVPSVPHSETAASASSMLEESIRKQKLEGGSLSKAIVHSVWKSLALNAVLAGVNTIAAYIGPLLISNFVNFLLSNDDNSNIKYGLILAFIFFLAKTVESLSQRQWYFGAQRIGIQVRAALMALVYSKSLMIKCGGPTHGKIINLINVDVERIGDFCWYVHGVWLLPVQIILALVILYINLGCTPSIAALAVTILVMVCNTPLANMQEGLHSKIMEAKDSRIKMTSETMKNIRILKLHSWESTFLQKLLQLRDTEKKWLHKYLYLCSAVATLFWASPTLVSVFTFGACILVKTELTAATVLSALATFRILQEPIYNLPELISMITQTKVSVDRIQEFIKEEDQNQFMNRHASKTSTTAIEIKPGEYAWEANDQFLKKPTIHIAEKLIIKKGQKVAVCGPVGSGKSSLLCSMLGEISLVSGAATKVYGTRSYVPQSPWIQSGTIRENILFGKQMNKDLFENVVDGCALLQDINLWSDGDLTMVEERGINLSGGQKQRIQLARAVYNDSDIYFLDDPFSAVDAHTGSHMFKECLMKLLYDKTVVYATHQLEFLEAADLILVMKDGKIVESGRYRDLIACPHSEFVQQMAAHEETVCQIPCRKDDSVCCRPCQKNPTEIAEENIQEIMLDWKRTREEEAMTGRVKWSVYSTFVTLAYKGALVPVILLCQILFQVMQMGSNYWMSWATEKKGRVDNVQLMGVFALLSGGSSIFILGRTVLMATVAVETAQRLFHGMITSVFRAPVSFFDTTPSSRILSRSSTDQSTVDTDIPYRLAGLVFALIQLLSIIVLMSQAAWQVILLFFVVLALSVWYQAYYITTARELARMVGIRKAPILHHFSESIAGAATIRCFKQEKIFLTKVMALIDDYSRVAFHNYATMEWLSVRINFLFNLVFYFVLVILVTLPRSAINPSLAGLVATYGLNLNVLQAWVIWNLCNVENKMISVERILQFSNIPSEAPLIIQDCRPEPEWPKEGKIEFLNLHIQYDPSGPMVLKGVTCVFPGQKKIAVVGRTGSGKSTLVQALFRVVEPLEGCILIDGVHISKIGLQDLRSKLGIIPQDPTLFLGTVRTNLDPLEQHTDQDLWEVLRKCHLAEIVQEDPRLLDAPVAENGENWSVGQRQLVCLARLLLKKRKILVLDEATASIDTATDNLIQKTIREETSGCTVITVAHRIPTVIDSDLVLVLNEGTIAEYDQPSQLLQDNSSSFSKLVSEFLRRSSQSNCKKR 1291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03838 1291 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 730 1006 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo2g03838 1291 CDD ABC_6TM_ABCC_D1 116 403 IPR044746 GO:0140359
Mepo2g03838 1291 FunFam Multidrug resistance-associated protein 4 413 672 - -
Mepo2g03838 1291 Gene3D - 1026 1279 IPR027417 -
Mepo2g03838 1291 Gene3D - 452 672 IPR027417 -
Mepo2g03838 1291 CDD ABC_6TM_ABCC_D2 728 1018 IPR044726 GO:0140359
Mepo2g03838 1291 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 42 1283 - -
Mepo2g03838 1291 Pfam ABC transporter transmembrane region 116 382 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo2g03838 1291 Pfam ABC transporter transmembrane region 732 970 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo2g03838 1291 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 430 656 IPR003439 GO:0005524
Mepo2g03838 1291 SUPERFAMILY ABC transporter transmembrane region 729 1023 IPR036640 GO:0005524|GO:0016020
Mepo2g03838 1291 Gene3D ABC transporter type 1, transmembrane domain 696 1024 IPR036640 GO:0005524|GO:0016020
Mepo2g03838 1291 Gene3D ABC transporter type 1, transmembrane domain 102 413 IPR036640 GO:0005524|GO:0016020
Mepo2g03838 1291 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1035 1269 IPR027417 -
Mepo2g03838 1291 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 115 395 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo2g03838 1291 SMART AAA_5 1069 1254 IPR003593 GO:0016887
Mepo2g03838 1291 SMART AAA_5 459 633 IPR003593 GO:0016887
Mepo2g03838 1291 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1043 1277 IPR003439 GO:0005524
Mepo2g03838 1291 CDD ABCC_MRP_domain2 1041 1261 - -
Mepo2g03838 1291 FunFam ABC transporter C family member 3 1026 1278 - -
Mepo2g03838 1291 ProSitePatterns ABC transporters family signature. 558 572 IPR017871 GO:0005524|GO:0016887
Mepo2g03838 1291 Pfam ABC transporter 1060 1208 IPR003439 GO:0005524
Mepo2g03838 1291 CDD ABCC_MRP_domain1 428 633 - -
Mepo2g03838 1291 SUPERFAMILY ABC transporter transmembrane region 108 410 IPR036640 GO:0005524|GO:0016020
Mepo2g03838 1291 FunFam ABC transporter C family member 10 99 411 - -
Mepo2g03838 1291 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 454 646 IPR027417 -
Mepo2g03838 1291 FunFam ABC transporter C family member 5 693 1024 - -
Mepo2g03838 1291 Pfam ABC transporter 455 585 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03838 Mepo-Chr2 47598328 47604312 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03838 115 677 Calmodulin-binding Proteins AT2G36910 21.280 2.07e-18 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03838 - - mtr:25501707 2459.49