Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03831 ATGTGCTCATGGCATAATCACACTGCTAAGTACATTATAGTGAGTACTTATCCAATTGAATGGGGTTGGTCTCTTCTGTCTAACAACATGGATAATGCTTGCTTTCCTTCTCCACACATTGATGCTTTTCCAGCTGGTCTGCGAGTTATCGTTGTTGATGATGATCAAACTTGGCTTAGAATCCTTGAAAAAATGCTCAAAAAATGCTTTTACCGAGTGACCACATGTTGCTTAGCAATAGAGGCTCTTAAGAAGCTCCGCGAAAGTAAAGATGCATATGACATAGTGATCAGCGATGTAAACATGCCTGACATGGATGGTTTCAAGCTTCTTGAACATGTTGGACTTGAGATGGATCTTCCTGTTATTATGATGTCTGTTGATGGAGAAACAAGCAGGGTGATGAAAGGTGTTCAACATGGAGCATGTGATTATTTGCTTAAGCCTATAAGGATGAAAGAATTGCGAAACATATGGCAACATGTCTTAAGAAAAAGAATACACGAGGCAAGACAGTTTGAAAGTGTTGAGGGAATTCACTTAATGAGAAATGGATCAGATCACACTGATGATGGTAACATGTTTGCTGTAGGAAAAGAAATGAACTTAATGAAGAAAAGGAAAGATTTTGATAGTAAACATGATGACCAAGAATTCGTAGATCAAACTTTCATAAAGAAAGCTAGAGTAGTTTGGTCTGTGGATCTTCATCAGAAATTTGTTAAAGCAGTGAATCAGCTTGGATTTGATAAAGTTGGTCCCAAGAAAATTCTAGATTTGATGAATGTTCCGTGGCTGACTAGAGAAAATGTTGCTAGTCACTTGCAGAAATACCGGCTCTACTTGAGTAGGTTGCAAAAGGAAAATGATCAGAAATCTTCCTCAGGTGGAAATGGAATAATAAAGCATTCAGATTTACCTTCAAAAGATCCAGGATGTTTAAGCTTTCTCAACTCTTTCAACAAGCAACAAAACGAAGGTGCAATCGACAGCTTTGGATATTCAGATGGGGCATTAAAAATTCAAATGGATACTACAAGTCATGAAAAAAGAAGAGCTTCCACTAGTGACATTCCTGATCCAAAGATAAGAAAAAGTTCAGAGATAGGTCTTAACCAATCTCTTGAATCTGCCGAATCAGAAGCAAACCATACAGTATTTAATCTCGATTGCATCTCTGATATGTCGAATGATCAATCTCCTGATATCATTTTCACTTCCAATTTGAGTTCAAAAACACCAGGATTTAATCTCGATTGCATCTCTGATATGGAAATCTACAAAAGAAACTCACCAAAGTCAATTTCAACACCTTTTGATGAGGACTTAAATTTGTTTTTGTTACAAGGTGAATACTATGATATGAACTTTGACATGCAGAATATAGAGATGTCATAG 1398 0.3677 MCSWHNHTAKYIIVSTYPIEWGWSLLSNNMDNACFPSPHIDAFPAGLRVIVVDDDQTWLRILEKMLKKCFYRVTTCCLAIEALKKLRESKDAYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVLRKRIHEARQFESVEGIHLMRNGSDHTDDGNMFAVGKEMNLMKKRKDFDSKHDDQEFVDQTFIKKARVVWSVDLHQKFVKAVNQLGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLSRLQKENDQKSSSGGNGIIKHSDLPSKDPGCLSFLNSFNKQQNEGAIDSFGYSDGALKIQMDTTSHEKRRASTSDIPDPKIRKSSEIGLNQSLESAESEANHTVFNLDCISDMSNDQSPDIIFTSNLSSKTPGFNLDCISDMEIYKRNSPKSISTPFDEDLNLFLLQGEYYDMNFDMQNIEMS 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03831 465 Pfam Response regulator receiver domain 49 158 IPR001789 GO:0000160
Mepo2g03831 465 SMART REC_2 47 159 IPR001789 GO:0000160
Mepo2g03831 465 SUPERFAMILY CheY-like 46 177 IPR011006 -
Mepo2g03831 465 PANTHER TWO-COMPONENT RESPONSE REGULATOR 47 335 IPR045279 GO:0009736
Mepo2g03831 465 Pfam Myb-like DNA-binding domain 229 279 IPR001005 -
Mepo2g03831 465 FunFam Two-component response regulator 223 286 - -
Mepo2g03831 465 MobiDBLite consensus disorder prediction 345 364 - -
Mepo2g03831 465 Gene3D - 223 286 - -
Mepo2g03831 465 ProSiteProfiles Response regulatory domain profile. 48 163 IPR001789 GO:0000160
Mepo2g03831 465 Gene3D - 47 205 - -
Mepo2g03831 465 SUPERFAMILY Homeodomain-like 225 284 IPR009057 -
Mepo2g03831 465 NCBIfam myb-like DNA-binding domain, SHAQKYF class 227 280 IPR006447 GO:0003677
Mepo2g03831 465 CDD REC_typeB_ARR-like 49 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03831 Mepo-Chr2 47544555 47547448 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03831 40 293 Response Regulator Gene Family AT2G25180 56.420 1.44e-84 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Mepo2g03831 Response_reg 6.2e-23 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03831 K14491 - gmx:100778324 576.244