Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03818 ATGAAGCTTTCTTCAGCTGGGTTTAGTCCTCCACCTCAAGAAGGAGAAAAGCGGGTTCTAGATTCAGAACTTTGGCATGCTTGTGCTGGTCCTCTTGTTTGTTTGCCAGCTGATGGAAGCCGTGTGGTTTACTTTCCACAAGGTCACAGTGAACAGGTTGCTGTATCTACCAACAGGGAAGTTGATACTTATATCCCAAATCCAAGCTTACCTCCCCAACTTATTTGTCAACTTCATAATCTGACTATGCATGCAGATACAGAGACAGATGAAGTGTATGCACAGATGACCTTGCAACCTCTAAATCCTGAAGAGCAAAAGGAGGCATATCTTCCTGCAGAGTTGGGAACCGCAAATAAACAGCCAACAAACTACTTCTGCAAAATTTTGACAGCAAGTGATACAAGCACTCATGGAGGTTTCTCTGTTCCTCGCCGGGCAGCTGAAAAAGTTTTTCCTCCATTGGACTTTACACAACAGCCTCCTGCTCAAGAGTTGATTGCAAGGGATTTGCATGGTAATGACTGGAAATTCAAACATATCTTCCGTGGCCAACCGAAGAGGCATTTGCTTACAACAGGGTGGAGTGTCTTTGTGAGTGCTAAAAGACTTGTTGCTGGTGATTCAGTGCTGTTTATATGGAATGAAAAAAATCAGTTGCTTCTTGGCATTCGGCGTGCTAGTCGACCACAACATATGATGCCTTCATCAGTGTTGTCAAGTGATAGCATGCACCTGGGGCTGCTTGCTGCTGCAGCTCATGCAGCCGCAACAAACAGTCGTTTCACCATTTTCTATAACCCGCGTGCTAGCCCATCAGAATTTGTCATTCCCCTAGCGAAGTATGTTAAGGCTGTATATCATACTCGAGTTTCAGTTGGTATGCGCTTCAGGATGCTTTTTGAAACAGAGGAATCTAGTGTTCGGCGATACATGGGAACAATAACCGGCATCAGTGACCTGGATTCTGTCCGGTGGCCAAATTCACATTGGCGCTCAGTGAAGGTTGGCTGGGATGAATCCACAGCAGGTGAGAGGCAACCTAGAGTGTCTCTATGGGAAATTGAGCCACTAACAACCTTTCCAATGTATCCATCTCCGTTCCCCCTTAGGCTTAAAAGACCATGGCCTCCAGGACTGCCTTCGTTCCATGGCCTTAAGGATGATGATTTTGGCATGAATTCTCCCCTATTGTGGCTTCGAGATGCAGATAGAGGGCTTCAGACTCTTAATTTTCAAGGGATGGGTGTTAATCCTTGGATGCAGGCAAGGCTCGATCCGTCCATGATGAATTTGCAACCAGATATGTACCAAGCTATGGCAGCTGCTGCACTTCAGGATATGAGGACTTTAGATCCTTCTAAGCAGCATCCTGCTTCCTTGCTTCAATTTCAGCAGCCACAGAATTTCTCCAATGGTAATGCTGCTTTAATGCAGAATCAGATGTTGCAGCAATCTCAACCTCATCAGGCTTTTCCAAAGAATCAAGAAAGTCAGCATCCATCTCAATCTCAGGCTCAAACACAACAATTCCAGCAGCTTCTTCAGCATCAGCACTCATTCACCAATCAAAATTATCATCTGCAGCAACAGCAACAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAACAACAGCAGCAACAACAGCAGCAGCAGCAACATCATCATCATCAGCAGCAACAACAACAGCAGCAACAACAATCACAACAGCAGCAACAAGTTGTAGATCATCAACAGATGTCAAATGCCGTCTCCACAATGTCTCAGTTTGTTTCCATACCTCCATCTCAATCAACACAGCCCATGCAAGCCATTTCTTCAATTGGCCATCAACAAAACTTTTCTGACTCAAATGTGAACCCAGTTTCTCCTTTGCACAATATGTTAGGTTCATTTTCCAATGACGAAACATCTCACCTTCTCAACTTTCCTAGATCAAACTCTTGGGTTCCTGTTCAATCTTCAACCGCACGGCCCTCCAAGCGCGTTGCAGTGGACCCTCTCCTCTCTTCAGGAGCATCTCATTATGTTCTGCCTCAAGTGGAACAACTAGGGCAGTCACAGACTACCATGTCTCAAAATGCCATCACCTTGCCCCCATTTCCTGGTAGGGAGTGTGCTATAGAAGGGAACACCGATCCACAAAACCATCTTTTGTTTGGTTTTAACATAGAGCCCTCATCACATTTAGTTTACAATGAGATGTCTAACCTTAAGAGGGTCAATAGCAACTGTGACTCATCAACTGCACCTTTTCAATCTTCCACCTACTTGAATACCACAGGTGCTGATTCTTCATTGAATCCTGGATTGACACACGGCGTTGGTGAGTCGGGCTTCATGCAAACTCCAGAAAATGGAGGTCAAGGAAACCCACAAAACAAAACCTTTGTGAAGGTTTACAAGTCAGGGTCCTTCGGAAGATCCTTGGATATCACCAAATTCTCCAACTACCCCGAGCTACGCAGCGAGCTTGCTCGTATGTTTGGGCTTGAAGGTGAGTTGGAGGACCCTGTAAGATCAGGCTGGCAGCTTGTATTTGTTGATCAAGAGAATGATGTTCTTCTCCTCGGTGATGGTCCATGGCCGGAATTTGTAAATAGTGTATGGTGCATCAAGATACTTTCCCCTCAGGAAGTGCAGCAAATGGGGACCAATGGTCTAGAGCTTCTGAACTCAGCTCCAACCCAGAGGCTCTCTAATGGTATCTGTGATGACTACACTGGCCGTGAGGACTCAAGAAATTTAAGCACCGGGCTAACAACTGTGGGGTCTTTAGACTACTGA 2790 0.4573 MKLSSAGFSPPPQEGEKRVLDSELWHACAGPLVCLPADGSRVVYFPQGHSEQVAVSTNREVDTYIPNPSLPPQLICQLHNLTMHADTETDEVYAQMTLQPLNPEEQKEAYLPAELGTANKQPTNYFCKILTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIARDLHGNDWKFKHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQHMMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPPGLPSFHGLKDDDFGMNSPLLWLRDADRGLQTLNFQGMGVNPWMQARLDPSMMNLQPDMYQAMAAAALQDMRTLDPSKQHPASLLQFQQPQNFSNGNAALMQNQMLQQSQPHQAFPKNQESQHPSQSQAQTQQFQQLLQHQHSFTNQNYHLQQQQQQQQQQQQQQQQQQQQQQQQQQHHHHQQQQQQQQQQSQQQQQVVDHQQMSNAVSTMSQFVSIPPSQSTQPMQAISSIGHQQNFSDSNVNPVSPLHNMLGSFSNDETSHLLNFPRSNSWVPVQSSTARPSKRVAVDPLLSSGASHYVLPQVEQLGQSQTTMSQNAITLPPFPGRECAIEGNTDPQNHLLFGFNIEPSSHLVYNEMSNLKRVNSNCDSSTAPFQSSTYLNTTGADSSLNPGLTHGVGESGFMQTPENGGQGNPQNKTFVKVYKSGSFGRSLDITKFSNYPELRSELARMFGLEGELEDPVRSGWQLVFVDQENDVLLLGDGPWPEFVNSVWCIKILSPQEVQQMGTNGLELLNSAPTQRLSNGICDDYTGREDSRNLSTGLTTVGSLDY 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03818 929 Gene3D - 792 885 - -
Mepo2g03818 929 CDD B3_DNA 125 226 IPR003340 GO:0003677
Mepo2g03818 929 SMART B3_2 126 228 IPR003340 GO:0003677
Mepo2g03818 929 ProSiteProfiles PB1 domain profile. 796 880 IPR000270 GO:0005515
Mepo2g03818 929 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 17 885 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mepo2g03818 929 FunFam Auxin response factor 124 228 - -
Mepo2g03818 929 FunFam Auxin response factor 791 885 - -
Mepo2g03818 929 SUPERFAMILY DNA-binding pseudobarrel domain 111 255 IPR015300 -
Mepo2g03818 929 Gene3D - 290 362 - -
Mepo2g03818 929 Coils Coil 528 554 - -
Mepo2g03818 929 FunFam Auxin response factor 290 362 - -
Mepo2g03818 929 Pfam Auxin response factor 252 335 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mepo2g03818 929 MobiDBLite consensus disorder prediction 548 581 - -
Mepo2g03818 929 MobiDBLite consensus disorder prediction 483 513 - -
Mepo2g03818 929 ProSiteProfiles B3 DNA-binding domain profile. 126 228 IPR003340 GO:0003677
Mepo2g03818 929 Gene3D - 124 227 IPR015300 -
Mepo2g03818 929 Pfam B3 DNA binding domain 126 227 IPR003340 GO:0003677
Mepo2g03818 929 SUPERFAMILY CAD & PB1 domains 792 871 - -
Mepo2g03818 929 Pfam AUX/IAA family 791 881 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03818 Mepo-Chr2 47441692 47448711 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03818 1 929 B3 DNA Binding Superfamily AT1G30330 68.509 0.0 1158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mepo2g03818 AUX_IAA 1.1e-06 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03818 - - psat:127108416 1653.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g03818 2 47441692 47448711 Mepo2g03818 2 47441692 47448711 ECH