Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03817 ATGGCGAAGCAGATTCACGAGATCAAGGATTTTCTTTTGACGGCGCGTAGGAAGGATGCTCGATCCGTGAAAATCAAGAGAAGTAAGGATGTTGTGAAGTTCAAGGTTCGTTGCTCAAAGTATTTGTACACACTTTGTGTGTTTGATACTGACAAAGCTGATAAGTTGAAGCAATCTCTTCCTCCTGGTTTGAATGTTCAAGATCTTTAG 210 0.4095 MAKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDTDKADKLKQSLPPGLNVQDL 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03817 69 PANTHER 60S RIBOSOMAL PROTEIN L38 1 68 IPR002675 GO:0003735|GO:0005840|GO:0006412
Mepo2g03817 69 FunFam 60S ribosomal protein L38 1 69 - -
Mepo2g03817 69 Gene3D - 1 69 IPR038464 -
Mepo2g03817 69 Pfam Ribosomal L38e protein family 3 68 IPR002675 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03817 Mepo-Chr2 47436091 47436727 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03817 1 69 Cytoplasmic Ribosomal Protein Gene Family AT3G59540 91.304 2.71e-42 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03817 K02923 - atri:130800659 134.035