Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03793 ATGGAGGAGGATGAGATTCAAGCCCAACATAAATTCCCAAGAGTTGAAAATGAAGAAGAAAATCATGGAAGAGAGATCATTAGAAGAGGTGGAGGAGGATGTGATGGAAGTGCAAATCTTAACAGGTTCAATAGTTGGCATCATTCTTCAAGAATTATAAGGGTTTCAAGAGCTTCTGGTGGAAAAGATAGGCATAGTAAAGTAATGACTTCAAAGGGTTTAAGAGATAGAAGGGTTAGGCTTTCTGTTACAACAGCTATTCAGTTTTATGATCTTCAAGATAGACTTGGTTATGACCAACCAAGTAAAGCTGTTGAATGGTTGATAAAATCAGCTTCTGATGCTATTTCAGAACTACCTTCTCTCAACAACTCATTATTCTCTGGTAATACACCTAATAATAATAATAATCAACCAAGTGAACAAGGTGTTGATTCAGTTCATGATGCTGAAATGGTTGTTGAGAATGGTGAAAACAATTATCAAAGTCAGAATCTTTCTTTGTCTAAATCTGGTTGTAGTAGCACTTCTGAGACAAGTAAAGGTTCTGGTTTGTCTCTTTCAAGATCTGATGTTCGTGTGAGCCGTGTAAAAGCTAGAGAAAGAGCAAGGGAAAGAACAGCTAAAGAGAAGGACAAAGAGATTAACCATGAATCTCACAATACTCATCAACATCACAACAATGTGAACTCTTCCATTTCTCAAACAGCTTCATTCACTGAACTACTTACTTGTGGAATCAACAATACAGTGACTACCACAAATAGTCCAAGAGGGTCAGCTGAAGAACCTAGCTTTTTCAACAAAGCTAGACAACAGCAGCAGCAGCAGCAGCAATGGAATTCTTCAGCACCAATGGATCATTACTTTAGTCATGTGTTTCCAGGATCTTCTTCATCAAGAGCACATCATCATCATCATCTATTAGGACATTCACTTCATGATCATCAATCAATGACAATGTCTAATTCAGTTTCACCATTCAGTAATAGTGGTGAGAATCATTCTACAGATCAGCATCAGCATCAGCATCATTTGCAGCATCCATTTTCATTCATACCAGATCATATGATGCAAAATGTGGTTACTTCTTCTTCTACTCAACCAAGCGGGAACAACAATGATTACAATTTGAATTTCACAATCTCTCCGGGCCTTGCTGGTTATAATAGGGGGACCCTTCAGTCCAATTCACCGTCTCTTGTGTCTCATCTTCAAAGGTTTTCAGTTTCACCTTTAGATGGATCCAACAATCTACCTTTTTTCATGGGAGGAGGAGGAGGTGCTTCTGCTTCTTCTTCTCCTGCTTCAGCTTCAGCTTCAGCTTCAGCTGCTCCTACAATGGAGAATAATCATCATCACCATCACCAGATTCAACACCATCACTTTTCATCTGTTTTTGATGGTAGCAGCTTGCAGCTCTATTCAGATCAGAAAGGGAAACCCAAAAACTGA 1455 0.3883 MEEDEIQAQHKFPRVENEEENHGREIIRRGGGGCDGSANLNRFNSWHHSSRIIRVSRASGGKDRHSKVMTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIKSASDAISELPSLNNSLFSGNTPNNNNNQPSEQGVDSVHDAEMVVENGENNYQSQNLSLSKSGCSSTSETSKGSGLSLSRSDVRVSRVKARERARERTAKEKDKEINHESHNTHQHHNNVNSSISQTASFTELLTCGINNTVTTTNSPRGSAEEPSFFNKARQQQQQQQQWNSSAPMDHYFSHVFPGSSSSRAHHHHHLLGHSLHDHQSMTMSNSVSPFSNSGENHSTDQHQHQHHLQHPFSFIPDHMMQNVVTSSSTQPSGNNNDYNLNFTISPGLAGYNRGTLQSNSPSLVSHLQRFSVSPLDGSNNLPFFMGGGGGASASSSPASASASASAAPTMENNHHHHHQIQHHHFSSVFDGSSLQLYSDQKGKPKN 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03793 484 ProSiteProfiles R domain profile. 193 211 IPR017888 -
Mepo2g03793 484 MobiDBLite consensus disorder prediction 430 448 - -
Mepo2g03793 484 MobiDBLite consensus disorder prediction 163 190 - -
Mepo2g03793 484 MobiDBLite consensus disorder prediction 318 336 - -
Mepo2g03793 484 MobiDBLite consensus disorder prediction 427 463 - -
Mepo2g03793 484 MobiDBLite consensus disorder prediction 163 230 - -
Mepo2g03793 484 MobiDBLite consensus disorder prediction 318 343 - -
Mepo2g03793 484 ProSiteProfiles TCP domain profile. 61 119 IPR017887 -
Mepo2g03793 484 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 45 373 IPR005333 GO:0003700
Mepo2g03793 484 MobiDBLite consensus disorder prediction 193 224 - -
Mepo2g03793 484 Pfam TCP family transcription factor 60 212 IPR017887 -
Mepo2g03793 484 MobiDBLite consensus disorder prediction 1 23 - -
Mepo2g03793 484 MobiDBLite consensus disorder prediction 250 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03793 Mepo-Chr2 47250069 47258012 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03793 41 484 TCP Transcription Factor Family AT4G18390 40.299 1.75e-70 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mepo2g03793 TCP 8.1e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03793 - - mtr:120577367 724.931