Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03760 ATGATGACTCCAAACTTGAACTTGGAACCTGAAAATCAGTCAGAAACACCCCAAGATCTAGATCCTATGACTCTTGACTTGACACTCAATTTCAGTTCGAGTGATGCCGAGTTAATGGGTTCAAGTGATGCTAGTAGTGAAGTAGGAGCTGCTGAAGTTCATGCTTCGCCATCGGTAACTCCAAGGATATTCTCTTGTAATTACTGCAAGAGGAAGTTCTATAGCTCGCAAGCATTAGGGGGCCATCAGAACGCTCACAAAAGGGAGAGGACGATGGCTAAACGTGCAATGCGAATGGGAATGTTCACCGAACGGTATACAAGCCTTGCATCTCTACCTCTACATGGTTCGCCTTTTCGGTCCCTCGGTGTTGAAGCTCATTCTGCAATGCATCAAAGACATATGCAACCATCATCATCAATGAGAGCTCCAGATATGAGAGCTGCTGCAAAATTTGATAGAAACCATTTTGGATCGCTAGTTTACGTTGAAGATGATGATGTAGGTAGCTTTTGGCCCGGAAGTTTTAGACAGGTGGACCAAGGAGGAGGTGTTAGTATAGGATATCCTCAAAGTTCAAATTCTAGTTTTGTTCCAATGGTACCTCCTCCACCTCAAGCATCTACATCTCCTGATCTTACACTGAAGCTATAA 654 0.4388 MMTPNLNLEPENQSETPQDLDPMTLDLTLNFSSSDAELMGSSDASSEVGAAEVHASPSVTPRIFSCNYCKRKFYSSQALGGHQNAHKRERTMAKRAMRMGMFTERYTSLASLPLHGSPFRSLGVEAHSAMHQRHMQPSSSMRAPDMRAAAKFDRNHFGSLVYVEDDDVGSFWPGSFRQVDQGGGVSIGYPQSSNSSFVPMVPPPPQASTSPDLTLKL 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03760 217 FunFam Zinc finger protein 2 41 110 - -
Mepo2g03760 217 SUPERFAMILY beta-beta-alpha zinc fingers 61 92 IPR036236 -
Mepo2g03760 217 MobiDBLite consensus disorder prediction 195 217 - -
Mepo2g03760 217 ProSitePatterns Zinc finger C2H2 type domain signature. 66 86 IPR013087 -
Mepo2g03760 217 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 20 157 IPR044246 GO:0009788
Mepo2g03760 217 MobiDBLite consensus disorder prediction 1 22 - -
Mepo2g03760 217 Gene3D Classic Zinc Finger 40 111 - -
Mepo2g03760 217 ProSiteProfiles Zinc finger C2H2 type domain profile. 64 91 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03760 Mepo-Chr2 46903204 46906145 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03760 57 217 C2H2 Transcription Factor Family AT1G66140 46.524 5.14e-45 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mepo2g03760 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03760 - - gmx:100775305 342.043