Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03730 ATGGAGAATAACCCACTTCAGCTTTTGCCTCACCTCTCTGTAACACTCTTTATGATCATGATCATAGTTTTGTTTCCTATGAGTACTGCTGAAGCAACTTCAACAGTTTCTTCTATCAAAACTGATGCAAAGGCCCTTCTTGCATTCAAAAAATTGATTCAGAAAGATCCAAATGGAGCTTTATCAAGTTGGAATCCAAAAACCAATCCATGCACATGGGATGGCGTGACTTGCACCCTTGGAAGAGTCACTGGTCTTGAAGTTAGTGGAAACAATGATGTTTCTGAAACTATTTCTCTTGATCCTTTATCTTCTTTAGATATGTTATCTGTTTTGAAATTTTCTCTTAATTCATTTTCTGTAAATTCCACTTCCTTGCTTAAGTTACCATATAGTATAACACAACTTGATCTATTCCTTGGTAAAGTTTTAGGTCCTGTTCCTGAAAATTTATTCTCCAACTGTCCTAATCTTGTTGTTGTAAATCTTTCTTACAACAATCTGACAGGTCCTATTCCTGATAACTTTATACAAAATTCTGATAAGCTTCAGACCCTTGATTTATCTTTCAACAATTTGACAGGTTCAATTTCTGATCTCAAAATTGATTGTAAATCATTGTTGCAACTTGATCTATCAGGAAACAATTTATCAGACTCATTTCCAATTTCTTTGTCAAATTGCACAAGCCTTAAGAGTTTGAATTTAGCAAGCAATTTTATTTCTGGTGGAATTCCAAAGGCTTTAGGCCAATTGAATAAATTACAGTCTTTGGATCTTTCACACAATCAAATTACTGGTTGGATCCCTTCTGAATTGGGAAATGTTTGTGGTTCTCTTTTAGAACTTAAACTTTCTTTCAACAATATAACTGGTTCTATTCCATTTGGTTTCAATTCTTGCACTTTGCTTCAAGTAGTTGATATTTCCAACAACAATATGACAGGTGAATTACCTGAGTCGGTAGTTCAGAGCCTTGGATCATTGCAGGAACTTAGGTTGGGAAATAATGCTATCTCTATGAAATTTCCATCTTCAATATCTTCATTGAAAAAATTGAGGATTGTGGATTTTAGTTCAAATAAAATTTATGGATCCATCCCTAGAGATTTGTGTCCAGGTGCAGGTTCACTTGAGGAGCTTAGAATGCCTGATAATCTCATAACAGGTGAAATTCCAGCTGAATTGTCAAAGTGTTCACAATTGAAGACTATTGATTTTAGTTTGAACTATCTCAATGGTTCAATTCCTGATGAGTTAGGAGAGCTTGAGAATCTTGAGCAGTTAATAGCATGGTTCAATGGTTTAGAAGGAAAAATTCCACCAAAGTTGGGACAATGTAAGAATCTTAAGGATCTTATATTGAATAATAATCACCTTAGTGGTGGAATTCCAACTGAGTTGTTCAATTGCAGCAATCTTGAATGGATATCACTGACAAGCAATGAACTCACAGGTGAAATACCACGAGAGTTCGGACTTTTGACAAGGTTAGCTGTTCTGCAGCTTGGAAACAACGGTTTTACAGGTGAGATACCATCAGAGCTAGGAAATTGCAACAGTTTGGTGTGGTTGGACTTGAACAGCAACAAGCTCACTGGAGAGATCCCTCCTAGACTTGGAAGGCAGCAAGGAGCAAAATCGCTGTTTGGCATTCTTTCAGGAAACACTTTGGTGTTTGTAAGAAATGTCGGAAACTCGTGTAAAGGAGTTGGAGGTTTGCTAGAATTCTCAGGAATCCGATCCGAACGGCTCTCACAGGTAGCATCATTGAGGTCTTGTGATTTCACAAGACTTTATTCTGGTCCTGTACTCAGCTTGTTCACAAAATACCAGACTCTGGAGTATCTTGATCTCTCCTACAATCAGTTACGCGGAAAAATACCGGACGAATTCGGAGATATGGTGGCCTTACAAGTACTTGAATTGTCTCACAATCAACTATCTGGTGAAATCCCTTCAACCCTTGGCCAGCTCAAAAATATAGGAGTGTTTGATGCATCACATAATAGACTACAGGGTACTATCCCAGACTCATTCTCAAACCTATCATTTTTGGTGCAAATAGACCTATCTTACAATGAGTTAACTGGTCAAATTCCATCTAGGGGACAACTAAGTACACTTCCAGCCACTCAGTATGCAAACAATCCAGGTCTTTGCGGCGTTCCATTGCCTGAGTGTAAGAATGACAACAGCCAATCTACATCGAATCCAAGTGACGATGTTGGCAGAGGAGGACATAGAAGATCAGTTGCATCATGGGCAAACAACATTGTCATGGGAATTCTTATTTCTGTTGCTTCTGTATGTCTTTTAATCGTGTGGGCGATTGCGATGCGCGTAAGGAGGAGAGAGGCCAAGGAAGTCAAGATGCTTAATAGATTGCAAGCATGCCATGCTGCTACAACATGGAAAATTGATAAAGAGAAAGAGCCATTAAGCATTAATGTTGCAACATTTCAGAGGCAATTGAGGAAGCTTAAATTCTCACAGTTGATTGAAGCAACCAATGGTTTCTCAGCAGAAAGCCTCATTGGTTGTGGTGGTTTTGGTGAAGTGTTCAAGGCCACACTCAAAGACGGAACATGTGTCGCGATAAAGAAGCTCATTCGACTGAGTTGCCAAGGCGATAGAGAATTCATGGCTGAGATGGAAACCTTAGGAAAAATCAAGCATAGAAACCTTGTCCCTTTATTGGGATACTGCAAAGTAGGAGAAGAGAGGCTACTTGTTTACGAATACATGGAATATGGAAGCCTAGAAGAGATGCTCCACGGAAGAATAAAAACACGTGATCGCCGAATTTTAACATGGGAAGAAAGGAAGAAGATTGCAAGAGGTGCTGCTAAAGGGCTTTGTTTTCTGCATCATAATTGCATCCCTCACATCATACACAGAGACATGAAATCAAGCAATGTGTTACTTGACAATGAAATGGAGTCAAGAGTCTCAGATTTCGGAATGGCAAGACTAATAAGTGCACTTGATACACATCTCAGTGTAAGCACACTAGCAGGAACACCTGGATATGTTCCACCAGAGTATTACCAAAGTTTCAGGTGCACTGCAAAGGGTGATGTTTATTCATTTGGTGTTGTAATGTTGGAACTTCTTAGCGGGAAAAGGCCTACTGATAAGGAGGATTTCGGTGACACAAACTTGGTTGGATGGGCTAAGATTAAGGTGCGCGAAGGGAAACAAATGGAAGTAATTGACACTGATTTGCTTTTGGAGAGTCAAGGAGGAACAAATGAAGCAGAAGTGAAAGAAGTGAAAGAAATGCTAAGATATTTGGAGGTTACTTTGCGGTGTGTCGACGATTTGCCTTCTAGAAGGCCAAGCATGCTGCAGGTAGTGGCCTTGTTGAGAGAGCTTATACCTGGATCAACTGATGGTAGTAGCAGCAGTGCATAA 3417 0.3939 MENNPLQLLPHLSVTLFMIMIIVLFPMSTAEATSTVSSIKTDAKALLAFKKLIQKDPNGALSSWNPKTNPCTWDGVTCTLGRVTGLEVSGNNDVSETISLDPLSSLDMLSVLKFSLNSFSVNSTSLLKLPYSITQLDLFLGKVLGPVPENLFSNCPNLVVVNLSYNNLTGPIPDNFIQNSDKLQTLDLSFNNLTGSISDLKIDCKSLLQLDLSGNNLSDSFPISLSNCTSLKSLNLASNFISGGIPKALGQLNKLQSLDLSHNQITGWIPSELGNVCGSLLELKLSFNNITGSIPFGFNSCTLLQVVDISNNNMTGELPESVVQSLGSLQELRLGNNAISMKFPSSISSLKKLRIVDFSSNKIYGSIPRDLCPGAGSLEELRMPDNLITGEIPAELSKCSQLKTIDFSLNYLNGSIPDELGELENLEQLIAWFNGLEGKIPPKLGQCKNLKDLILNNNHLSGGIPTELFNCSNLEWISLTSNELTGEIPREFGLLTRLAVLQLGNNGFTGEIPSELGNCNSLVWLDLNSNKLTGEIPPRLGRQQGAKSLFGILSGNTLVFVRNVGNSCKGVGGLLEFSGIRSERLSQVASLRSCDFTRLYSGPVLSLFTKYQTLEYLDLSYNQLRGKIPDEFGDMVALQVLELSHNQLSGEIPSTLGQLKNIGVFDASHNRLQGTIPDSFSNLSFLVQIDLSYNELTGQIPSRGQLSTLPATQYANNPGLCGVPLPECKNDNSQSTSNPSDDVGRGGHRRSVASWANNIVMGILISVASVCLLIVWAIAMRVRRREAKEVKMLNRLQACHAATTWKIDKEKEPLSINVATFQRQLRKLKFSQLIEATNGFSAESLIGCGGFGEVFKATLKDGTCVAIKKLIRLSCQGDREFMAEMETLGKIKHRNLVPLLGYCKVGEERLLVYEYMEYGSLEEMLHGRIKTRDRRILTWEERKKIARGAAKGLCFLHHNCIPHIIHRDMKSSNVLLDNEMESRVSDFGMARLISALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSFGVVMLELLSGKRPTDKEDFGDTNLVGWAKIKVREGKQMEVIDTDLLLESQGGTNEAEVKEVKEMLRYLEVTLRCVDDLPSRRPSMLQVVALLRELIPGSTDGSSSSA 1138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03730 1138 FunFam serine/threonine-protein kinase BRI1-like 2 801 915 - -
Mepo2g03730 1138 Gene3D - 553 609 - -
Mepo2g03730 1138 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 373 559 - -
Mepo2g03730 1138 CDD STKc_IRAK 846 1126 - -
Mepo2g03730 1138 SUPERFAMILY Protein kinase-like (PK-like) 821 1123 IPR011009 -
Mepo2g03730 1138 Pfam Leucine rich repeat N-terminal domain 40 78 IPR013210 -
Mepo2g03730 1138 Pfam Brassinosteroid receptor island domain 550 608 IPR045381 -
Mepo2g03730 1138 ProSiteProfiles Leucine-rich repeat profile. 254 275 IPR001611 GO:0005515
Mepo2g03730 1138 Gene3D Ribonuclease Inhibitor 82 728 IPR032675 -
Mepo2g03730 1138 SMART LRR_typ_2 635 659 IPR003591 -
Mepo2g03730 1138 SMART LRR_typ_2 448 471 IPR003591 -
Mepo2g03730 1138 SMART LRR_typ_2 521 543 IPR003591 -
Mepo2g03730 1138 SMART LRR_typ_2 326 349 IPR003591 -
Mepo2g03730 1138 SMART LRR_typ_2 495 519 IPR003591 -
Mepo2g03730 1138 SMART LRR_typ_2 252 276 IPR003591 -
Mepo2g03730 1138 SMART LRR_typ_2 423 447 IPR003591 -
Mepo2g03730 1138 SMART LRR_typ_2 350 374 IPR003591 -
Mepo2g03730 1138 SUPERFAMILY Outer arm dynein light chain 1 96 245 - -
Mepo2g03730 1138 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 201 294 - -
Mepo2g03730 1138 Gene3D Transferase(Phosphotransferase) domain 1 916 1133 - -
Mepo2g03730 1138 ProSitePatterns Serine/Threonine protein kinases active-site signature. 964 976 IPR008271 GO:0004672|GO:0006468
Mepo2g03730 1138 SUPERFAMILY RNI-like 201 441 - -
Mepo2g03730 1138 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 84 275 - -
Mepo2g03730 1138 ProSiteProfiles Protein kinase domain profile. 840 1127 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g03730 1138 FunFam serine/threonine-protein kinase BRI1-like 2 41 153 - -
Mepo2g03730 1138 Pfam Leucine Rich repeat 182 195 IPR001611 GO:0005515
Mepo2g03730 1138 Pfam Protein kinase domain 842 1055 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g03730 1138 SMART serkin_6 840 1127 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g03730 1138 Pfam Leucine rich repeat 607 648 IPR001611 GO:0005515
Mepo2g03730 1138 Pfam Leucine rich repeat 449 507 IPR001611 GO:0005515
Mepo2g03730 1138 Pfam Leucine rich repeat 304 363 IPR001611 GO:0005515
Mepo2g03730 1138 Pfam Leucine rich repeat 207 265 IPR001611 GO:0005515
Mepo2g03730 1138 FunFam serine/threonine-protein kinase BRI1-like 2 916 1134 - -
Mepo2g03730 1138 MobiDBLite consensus disorder prediction 728 742 - -
Mepo2g03730 1138 SUPERFAMILY L domain-like 377 727 - -
Mepo2g03730 1138 ProSitePatterns Protein kinases ATP-binding region signature. 846 869 IPR017441 GO:0005524
Mepo2g03730 1138 MobiDBLite consensus disorder prediction 725 748 - -
Mepo2g03730 1138 PRINTS Leucine-rich repeat signature 183 196 - -
Mepo2g03730 1138 PRINTS Leucine-rich repeat signature 252 265 - -
Mepo2g03730 1138 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 606 728 - -
Mepo2g03730 1138 Gene3D Phosphorylase Kinase; domain 1 799 915 - -
Mepo2g03730 1138 ProSiteProfiles Leucine-rich repeat profile. 182 204 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03730 Mepo-Chr2 46622890 46626472 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03730 17 1126 Receptor kinase-like Gene Family AT1G55610 47.145 0.0 984
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Mepo2g03730 Pkinase 6.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03730 - - mtr:120577570 2208.33