Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03717 ATGGTTTTTCCAAAGCCAGCTTCTGAATCTGACCTTATTCTTCACTCTAACTTTACCTCTCGTTATGCTAAGGACTCTCTTCCTAGGTTTAGCATGCCAGAGAACTCAATGCCAAAGGAAGTTGCATACCAGAACATACACGATGAGTTGCAGTTGGATGCTAATCCAAAGCTCAATTTGGCTTCTTTTGTGACCACTTCTATGGAGGAAGAATGCAACAAGCTTATAATGGAATCTATCAACAAGAACTATGTCGATATGGATGAGTATCCTGCAACCACTGATCTTCATAATCGATGTGTGAACATGATAGCGCGTTTGTTCAATGCTGAGATTGGAGAAAATGAGAGTGCAGTTGGTGCAGGAACAGTTGGATCATCAGAAGCCATAATGCTGGCAGGACTTGCATTCAAAAAGAAGTGGCAGAACAAACGCAAGGCTGAGGGTAAACCTTATGATAAGCCTAACATGGTCACTGGTGCCAATGTGCAGGTATGTTGGGAGAAATTTGCTAGGTACTTTGAGGTGGAATTAAGAGAAGTGAAGGTGAGAGAAGACTACTATGTGATGGACCCTGCCAAGGCTGTTGAGATGGTAGATGAGAACACAATTTGTGTGGCTGCAATCTTAGGTTCAACTTATAATGGAGAATTTGAAGATGTCAAACTCTTGAATGATCTCTTGTTAGAAAAAAACAAGCAAACTGGATGGGATACACCTATTCATGTTGATGCTGCAAGTGGTGGATTTATAGCTCCTTTCCTATATCCAGAGCTAGAGTGGGATTTCAGACTCCCATTAGTGAAGAGCATAAATGTTAGTGGTCACAAGTATGGTCTTGTTTATGCTGGAATTGGCTGGGTAATATGGAGGACCAAAGAAGACTTGCCCGAAGACCTTGTCTTCCATATTAATTACCTAGGAGCTGACCAACCCACATTCACCCTAAATTTTTCAAAAGGTTCTAGTCAGATAATTGCTCAATATTATCAGCTAATTCGCCTTGGTCAAGAGGGTTACCGGAGTATAATGGAGGACTGCAGAGAAAATGCGATGGTGCTGAAGGAACGCTTGGAAGAAACTGGATACTTTAACATACTCTCAAAAGACAATGGTGTTCCTATGGTAGCATTTTCTCTCAAGGACAGTAGCCAGTACAATGAATTCAAGATATCAAAGATGTTGCGGCGCCATGGTTGGGTTGTACCGGCATATCCAATGCCACCTGGTGCTCACGACATCAAAGTGCTTCGTGCGGTCATCAGAGCTGACTTTTCACGCACACTTGTTGAACGCCTTGCGCTTGACATTAAAAATGTGTTGCATGAGCTTCATAAACTTCCCCTTGACATTAACGATGAGAAGTTCTTGGTTGAAACTGCATTGGATGAACACAGGGAGATCATTGCTCAAGAATCCAACAAGCGTCAGAAAATCATGGCTGTCTAG 1449 0.4231 MVFPKPASESDLILHSNFTSRYAKDSLPRFSMPENSMPKEVAYQNIHDELQLDANPKLNLASFVTTSMEEECNKLIMESINKNYVDMDEYPATTDLHNRCVNMIARLFNAEIGENESAVGAGTVGSSEAIMLAGLAFKKKWQNKRKAEGKPYDKPNMVTGANVQVCWEKFARYFEVELREVKVREDYYVMDPAKAVEMVDENTICVAAILGSTYNGEFEDVKLLNDLLLEKNKQTGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRTKEDLPEDLVFHINYLGADQPTFTLNFSKGSSQIIAQYYQLIRLGQEGYRSIMEDCRENAMVLKERLEETGYFNILSKDNGVPMVAFSLKDSSQYNEFKISKMLRRHGWVVPAYPMPPGAHDIKVLRAVIRADFSRTLVERLALDIKNVLHELHKLPLDINDEKFLVETALDEHREIIAQESNKRQKIMAV 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03717 482 Pfam Pyridoxal-dependent decarboxylase conserved domain 33 381 IPR002129 GO:0016830|GO:0019752|GO:0030170
Mepo2g03717 482 Gene3D - 1 65 - -
Mepo2g03717 482 CDD DOPA_deC_like 59 438 - -
Mepo2g03717 482 Gene3D - 66 360 IPR015421 GO:0003824
Mepo2g03717 482 Gene3D - 361 448 - -
Mepo2g03717 482 FunFam Glutamate decarboxylase 66 360 - -
Mepo2g03717 482 FunFam Glutamate decarboxylase 4 65 - -
Mepo2g03717 482 FunFam Glutamate decarboxylase 361 448 - -
Mepo2g03717 482 SUPERFAMILY PLP-dependent transferases 16 446 IPR015424 -
Mepo2g03717 482 PANTHER GLUTAMATE DECARBOXYLASE 1 454 IPR010107 GO:0004351|GO:0006536|GO:0030170
Mepo2g03717 482 NCBIfam glutamate decarboxylase 17 444 IPR010107 GO:0004351|GO:0006536|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03717 Mepo-Chr2 46465487 46468227 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03717 1 452 Calmodulin-binding Proteins AT2G02010 78.761 0.0 767
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03717 K01580 - gmx:100782330 851.277