Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03699 ATGGCATCATCACAGGTTGAAATAGCTTCCTTTGATTCAACACCAACATGGGTTTCAACAAGAGTTGCTAAAAAAAACAACCTTGGAAGCCTAAATTTCAACAAAAAATTTCCTAATGTATTTGGAGACAAAAATGATTCTTCTTTGTCTGCATTGGTGAGTCCAAGGCACTCAAAGATCATCGATCGATGGGCTGCAAGACAAGCTCAAGAAGTGGCGAAAAATCTTGAAAAAAATGACGAGAATGTTGTTGTTAAGAGGTTTGATAATTTTCCTTCAAGGTCATCAAGTTTCAATTCTAGGAGAGGTTCTGTTTCGCCTCCTCGTTCTGATGGATCATCTGAAAGCGAAAAAACATTCAACATTGGTGCTTCTTCTCTTGTTCAAATGTGGGAAAAAAGGCTTAACAACCAATCCAATTGCACAAAACAAAATGCACCATCATATGTAAGAACTAATTCTGATGCAAGTAGCAACGAGATTAATGCTTGTTCCGTAGAAGAACATAGCAGACTATCAGAAAAAGGCGAATCCTCTGATGAAGCATTTTCATATGGGGAATATGATAAACCAAGACTAAGTATTGATGAAACTTGTTCACCTAAAGTGCATTGTAATTTAGATGCTTTTAAAAGCGAGAAAATCAAGGTTGCTGATATTATAAAGAAACTTTCGGTTACAAGTGATGAGAATGATCATGAGCTAAGTAATAGTGCGACGGGTTCTCCATGTCTTTCCACACCAAAACAATTAGTAGAACATAGAGGTTTTGGTCAGGTCACAAGTCACCCACGTATTAGAGGGCGCCAAGCATTTAATGATTTGATTATGCAGTTTGAGTGTGATCAACATGGAGAGCTCAACAATCTTGCAGAGCGAGGCGCTGTTTCTAAGTTCACACAAAGAGGTCGCATTCAGTCATTGCTTCGACTTCGATTGTTACAACGTGGAGTAGCAGCTTTTGATCCATCCCGCTTGAAATCAACAACACCGGAAGGGAACAAAAAACAATCAATAACACCAGAAGGGAACAAAAAACAACCAACAACACCGGAGGGGAACAAAAAACAACAAGGATCAGTAATTATGCAACTAAGGGAAAGATTTAACACAAAAGATGAACAGAGAACTTCATCCCTAATAGAAGTATCCGAGCCGAGAAGTATAGACAGGGAGACAGTAAACAATACCACACATTTGAATAAATTTCACACTACTATTCAACTTAACAAAGAGAATGTTTGCAGCAAGATAGTCACTAACATCCACACTAAGAAAAATAAACTGAATGTAGTTTCTCAAACTAAGGCAGATATCAAAGAAGAAGCTCATATAATTTATGGTTTTGACCCTCAAAATCATGGTCCAAAAGAAATTCCTGTGGAATCATCATCCAAGGTTGACTCAAACGTAAATGATATAACTGATAAAGTTGAGGCAAGAGACCAACAATTATATGATACTATTGAAACCAATTATTACAACGAGTTGTTAGAAGAGAAAGAGTGCAGTGACTATAATTATGATGAAATTAGCGCAAGTTATGACTGGGCCAGTCCTATTTCTCGGCCTAGAAGCTACTGGGAAGAGCTCAGACAAGAATGGTATAAGGAAATGCTTGACTTTGCTTCTGACAACGATGAGAGACGTAAACTCCTTGAAAGAAAAACAGTTTCAACTGTCCTTTCTAGCGACTTTCGAGAAAAGATGGATAAATTAATGCAATCTCATGTGGGAACACAAACACACTTGGTCAATAATCAATGCGACGAGGAAGATGAAGAAGGAAATGAAAAACAATTGATGGCATTTTATCACCATCGCCTGCGTGACACAAGGGAAAAAGAGGCGAGGAGTAATGAGGAAGAAATGGATGAAGAGAAGGTAGAGAAGCATGAACATGAAAGCATCAGTAGTGGCTCAGATCATGAACTTGGTGATTGTCAATCCTCATCATCAGTAGACACACCATCTTCAGCAACATGGAGTTATAGAGACACTGATATTGGAGATGATTCTGATAGAGTTGCATTTGTATCCTCACCATTGCCTTCTCAATCTCAATCTTGCTATGAAGATAGTAGAGAAAACTCTCCATCCGCAAATCAACGTTCAATTGAAATGGAAATTATATACGGTTTGCGAGGGCAAATGGAACAACTTTTTCAAGAGATGTCTGAGCTAAGAAAAACAATAAAAAACTGTACAGACACACAAATGCAGATGCAATTACAACAATCCCAAAACCAAGAGGTTCACAAATTTAAAGCAAAGAAATCCAGCAACAAGACATCAAAGAAAGGCATGTGCTGCATATGCAATGAAAATAAAGTAAACTCGGTTTTATATAGATGTGGTCACATGTGTGCATGTCTCAACTGTGCCAATGAGTTGCAATGGAAAAGTGGAAAATGTCCAATATGCCAAGTTGCAATACTAGATGTTGTCAAAGTACATACCAACCCATACTCTTTACATGATGAACAAAGACTAGCTATAGAGGATTAA 2508 0.378 MASSQVEIASFDSTPTWVSTRVAKKNNLGSLNFNKKFPNVFGDKNDSSLSALVSPRHSKIIDRWAARQAQEVAKNLEKNDENVVVKRFDNFPSRSSSFNSRRGSVSPPRSDGSSESEKTFNIGASSLVQMWEKRLNNQSNCTKQNAPSYVRTNSDASSNEINACSVEEHSRLSEKGESSDEAFSYGEYDKPRLSIDETCSPKVHCNLDAFKSEKIKVADIIKKLSVTSDENDHELSNSATGSPCLSTPKQLVEHRGFGQVTSHPRIRGRQAFNDLIMQFECDQHGELNNLAERGAVSKFTQRGRIQSLLRLRLLQRGVAAFDPSRLKSTTPEGNKKQSITPEGNKKQPTTPEGNKKQQGSVIMQLRERFNTKDEQRTSSLIEVSEPRSIDRETVNNTTHLNKFHTTIQLNKENVCSKIVTNIHTKKNKLNVVSQTKADIKEEAHIIYGFDPQNHGPKEIPVESSSKVDSNVNDITDKVEARDQQLYDTIETNYYNELLEEKECSDYNYDEISASYDWASPISRPRSYWEELRQEWYKEMLDFASDNDERRKLLERKTVSTVLSSDFREKMDKLMQSHVGTQTHLVNNQCDEEDEEGNEKQLMAFYHHRLRDTREKEARSNEEEMDEEKVEKHEHESISSGSDHELGDCQSSSSVDTPSSATWSYRDTDIGDDSDRVAFVSSPLPSQSQSCYEDSRENSPSANQRSIEMEIIYGLRGQMEQLFQEMSELRKTIKNCTDTQMQMQLQQSQNQEVHKFKAKKSSNKTSKKGMCCICNENKVNSVLYRCGHMCACLNCANELQWKSGKCPICQVAILDVVKVHTNPYSLHDEQRLAIED 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03699 835 MobiDBLite consensus disorder prediction 167 184 - -
Mepo2g03699 835 MobiDBLite consensus disorder prediction 94 118 - -
Mepo2g03699 835 ProSiteProfiles Zinc finger RING-type profile. 770 809 IPR001841 -
Mepo2g03699 835 MobiDBLite consensus disorder prediction 679 704 - -
Mepo2g03699 835 MobiDBLite consensus disorder prediction 606 641 - -
Mepo2g03699 835 MobiDBLite consensus disorder prediction 165 184 - -
Mepo2g03699 835 SUPERFAMILY RING/U-box 769 815 - -
Mepo2g03699 835 MobiDBLite consensus disorder prediction 322 359 - -
Mepo2g03699 835 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 741 820 IPR013083 -
Mepo2g03699 835 MobiDBLite consensus disorder prediction 138 158 - -
Mepo2g03699 835 Pfam Zinc finger, C3HC4 type (RING finger) 767 814 - -
Mepo2g03699 835 MobiDBLite consensus disorder prediction 327 359 - -
Mepo2g03699 835 MobiDBLite consensus disorder prediction 606 704 - -
Mepo2g03699 835 MobiDBLite consensus disorder prediction 642 666 - -
Mepo2g03699 835 CDD mRING-HC-C3HC5_NEU1 770 818 - -
Mepo2g03699 835 Coils Coil 718 738 - -
Mepo2g03699 835 PANTHER BNAC05G24000D PROTEIN 1 821 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03699 Mepo-Chr2 46308917 46312420 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03699 770 821 C3H Transcription Factor Family AT3G06140 36.538 1.93e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03699 - - mtr:25493454 1503.03