Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03688 ATGAGTTCAGGTTCAGGAGACAAGCAAAACATGCATGAACAAAATGGTTGCTTTGATCCCAACACAATGGATGAAGGTGTTGAAAACTCTCCCAATGATAACAACACAAACAACAATATTACCCTTGAAGAGAATTTCAAGCCTTCTGTGGAGGAACTACCTTACCACAATCATCAAAATTCACAACACCTTGATGATGTTTCCACTTATACAAATGGATTCACTCCCTCATCAGTAGACATTGAACAACAACAAAATCTTGGTTTGAACATAGGGAATACCTACAACAACATGGATAACCATTTGGTACAAGAAGTGTATCAGAACTCGAGTTGGGACCCTAGTGTTCAGGATATGGATTATGTCAATCACCAAGAACACCACCAACTATCTGAACAACAATATCAACAATTTATCGAGGCGCAAAACCATAACCAAAGTTACAATCCCTCAACCATTCTAGACCCTCATTACCCTTCACCAGATGTCCTAAACCTTCTCAACTTACCTAGATGCTCTTCATCTTTGCTCACAAATCCATCCACCATTTGCATGACAAACCCAACTCAAAATCCACCCAGTTTTCATAATTCAATGACTTTTCTTGGAGACCTTCCAATAGGATCATCAGACAACACAAGCGGATCACCGGTTTTGTATGATCCTCTATATCCTTTGAACCTTCCTCCACAGCCTCCAGCTCTCAGGGAATTGTTTCAATCTCTGCCTCGAGGCTATAGCATGCCAACCAACTCTAGAAATGGTTCTCTTTTCGGTGGAGGTGATGAGATGGAGGGAGATGGGGATATGGGAGTGCTGGAATTCAATAGGGTCACTGCTTCTGTTGGCAAAGGAAGAGGAGGAAAAGCTACCAAACATTTTGCAACTGAGAAACAAAGAAGAGAGCAATTGAATGGAAAGTACAAAATCTTGAGGGATCTCATCCCAAGTCCCACCAAGACTGATAGAGCATCAGTGGTTGGAGATGCTATTGAGTATATAAGAGAGCTGATTAGAACAGTGAATGAACTGAAATTATTGGTGGAGAAGAAAAGACATGGGAGGGAGATGTGTAAGAGACTTAAAACTGAAGATGATGCTGCAGAAAGCTGTAATATAAAGCCTTTTGGTGATCCAGATGGAAGTATAAGAACCTCATGGCTGCAGAGGAAATCCAAAGACAGTGAGGTTGATGTCCGGATAATCGATGATGATGTTACAATCAAACTGTTTCAGAGGAAGAAGGTTAATTGCTTGCTGTTTGTGTCCAAGGTTTTGGATGAACTTCAGTTGGAACTTCACCATGTTGCAGGTGGACATGTTGGTGAATATTGTAGTTTCTTGTTCAATAGCAAGGTAAATGAAGGTTCATCGGTGTATGCAAGTGCTATAGCCAACAGGGTGATTGATGTTATGGACACACAATATGCAGCAGGTCTTCCACATATAAGTAGGCTGTAG 1461 0.4107 MSSGSGDKQNMHEQNGCFDPNTMDEGVENSPNDNNTNNNITLEENFKPSVEELPYHNHQNSQHLDDVSTYTNGFTPSSVDIEQQQNLGLNIGNTYNNMDNHLVQEVYQNSSWDPSVQDMDYVNHQEHHQLSEQQYQQFIEAQNHNQSYNPSTILDPHYPSPDVLNLLNLPRCSSSLLTNPSTICMTNPTQNPPSFHNSMTFLGDLPIGSSDNTSGSPVLYDPLYPLNLPPQPPALRELFQSLPRGYSMPTNSRNGSLFGGGDEMEGDGDMGVLEFNRVTASVGKGRGGKATKHFATEKQRREQLNGKYKILRDLIPSPTKTDRASVVGDAIEYIRELIRTVNELKLLVEKKRHGREMCKRLKTEDDAAESCNIKPFGDPDGSIRTSWLQRKSKDSEVDVRIIDDDVTIKLFQRKKVNCLLFVSKVLDELQLELHHVAGGHVGEYCSFLFNSKVNEGSSVYASAIANRVIDVMDTQYAAGLPHISRL 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03688 486 Gene3D - 286 363 IPR036638 GO:0046983
Mepo2g03688 486 PANTHER TRANSCRIPTION FACTOR BHLH91 9 478 IPR045895 GO:0006355|GO:0048658
Mepo2g03688 486 MobiDBLite consensus disorder prediction 25 41 - -
Mepo2g03688 486 MobiDBLite consensus disorder prediction 1 17 - -
Mepo2g03688 486 Pfam Helix-loop-helix DNA-binding domain 291 337 IPR011598 GO:0046983
Mepo2g03688 486 SMART finulus 294 343 IPR011598 GO:0046983
Mepo2g03688 486 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 286 357 IPR036638 GO:0046983
Mepo2g03688 486 MobiDBLite consensus disorder prediction 1 41 - -
Mepo2g03688 486 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 288 337 IPR011598 GO:0046983
Mepo2g03688 486 CDD bHLH_AtMYC1_like 293 357 IPR045896 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03688 Mepo-Chr2 46208391 46210398 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03688 11 482 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31210 36.311 1.59e-91 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo2g03688 HLH 4.1e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03688 - - gmx:100782512 674.47