Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03649 ATGTCCGCCGATGATGAACCAATGCCTACTCGTTGGTCTTTCGAGGAGTTCAAAAAGTATTATGATGTTAGGCTTGGTAGAAAGAAACTGGTGGCGGAGAATGCTGTTAGTAATGGAAATTCGTCCAGCATTGCATCCAATGGCAATTCACACACCAAAGTAACATCGGATAGGGATCAGTTTCAAAGCCAGGGGCAGAATCCGACGCATACGAATGGTTTTGGTCCAAACGGTGTTGATGAAAAGCCGCAGAAGTCTTTGCTTCCACCTTTCGAATCTGCAGAAATGCGTACTTTAGCAGAGAGCTTAAGTAGGGATATCATTCGCGGGAGTCCAAATGTGAAGTGGGAAAGCATCAAGGGTTTAGAGAATGCCAAACGTTTACTGAAAGAAGCTGTAGTGATGCCGATTAAGTATCCCAAGTACTTTACTGGTCTGTTATCACCATGGAAGGGTATTCTCCTTTTTGGGCCCCCAGGGACTGGAAAGACAATGCTTGCAAAGGCAGTTGCAACTGAGTGCAACACTACATTTTTTAATATTTCAGCATCGTCTATTGTCAGCAAATGGCGAGGTGATTCAGAGAAGTTAGTAAAGGTGTTATTTGAGCTTGCAAGGCATCACGCGCCCGCAACAATATTTCTTGACGAAATTGATGCAATCATTAGTCAACGTGGTGAGGGGCGCAGTGAACATGAAGCAAGTAGACGGTTAAAAACTGAACTACTCATTCAGATGGATGGTTTAGCACGGACGGATGAACTTGTTTTTGTTTTGGCGGCAACAAATCTTCCCTGGGAATTGGATGCAGCCATGCTTAGACGTCTTGAGAAGCGAATCCTTGTACCGCTTCCAGAACCAGAAGCAAGAAGAGCGATGTTTGAGGAACTCCTTCCTCTGCAGCCTGATGAGGAACCAATGCCCTATGATTTACTGGTGGACCGGACAGAAGGATACTCAGGCTCGGATATCCGCCTACTTTGTAAAGAAACGGCAATGCAGCCATTGAGACGCTTAATGACACAACTTGAACAAGAACCAGATGTGGTGCCCGAAGAAGAGTTGCCAAAAGTTGGGCCAGTCGTGCCTGAAGATGTAGAGGCAGCTTTAAGGAACACACGGCCATCTGCTCATCTCCTTGCCCACAAATACGACACGTTTAATGCTGATTATGGTAGTCAAATACTTCAATGA 1194 0.4539 MSADDEPMPTRWSFEEFKKYYDVRLGRKKLVAENAVSNGNSSSIASNGNSHTKVTSDRDQFQSQGQNPTHTNGFGPNGVDEKPQKSLLPPFESAEMRTLAESLSRDIIRGSPNVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECNTTFFNISASSIVSKWRGDSEKLVKVLFELARHHAPATIFLDEIDAIISQRGEGRSEHEASRRLKTELLIQMDGLARTDELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARRAMFEELLPLQPDEEPMPYDLLVDRTEGYSGSDIRLLCKETAMQPLRRLMTQLEQEPDVVPEEELPKVGPVVPEDVEAALRNTRPSAHLLAHKYDTFNADYGSQILQ 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03649 397 SMART AAA_5 149 286 IPR003593 GO:0016887
Mepo2g03649 397 MobiDBLite consensus disorder prediction 36 86 - -
Mepo2g03649 397 MobiDBLite consensus disorder prediction 36 74 - -
Mepo2g03649 397 FunFam Katanin p60 ATPase-containing subunit A-like 2 285 373 - -
Mepo2g03649 397 FunFam Katanin p60 ATPase-containing subunit A-like 2 112 296 - -
Mepo2g03649 397 Gene3D - 112 378 IPR027417 -
Mepo2g03649 397 PANTHER AAA DOMAIN-CONTAINING 54 393 - -
Mepo2g03649 397 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 112 375 IPR027417 -
Mepo2g03649 397 Gene3D - 285 373 - -
Mepo2g03649 397 Pfam AAA+ lid domain 311 346 IPR041569 -
Mepo2g03649 397 CDD RecA-like_VPS4-like 119 282 - -
Mepo2g03649 397 Pfam ATPase family associated with various cellular activities (AAA) 153 283 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03649 Mepo-Chr2 45822268 45828992 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03649 147 356 Calmodulin-binding Proteins AT3G56690 37.089 5.84e-33 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03649 K07767 - gmx:100794098 652.899