Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03635 ATGGGTCGTAAAAAGATAGAGATGGAACTTGTAGAGAACAGGAGTGCTAGGTATGTCACATTTTCAAAAAGAAAGAGTGGTCTTTTTAAGAAAGCAAGTGAATTATCAATTCTTTGTAATGCTAGAGTTGGTATAGTTGGATTTACCCCAAGTGGTAATCCATTTGCTTTTGGTTCTCCAAATTTCCAAGCTGTGACTGAACAATACCTTCATGAAGGACAAGAATTAGAAGGTGGATCATCAAGGCAAATTGTAACACCCTCTGAAAATCCAAATATCAACATGATGAATAAAGAATTGAGTGGTTTAACCGAAGAGCTGAAGAAGGTGGAGGAAGTTAACAAAGGTAAAGCCCCTATTGCACTTGCTGATCTTAACTTAAAAGAACTTCTAAAAGTGAAGGCTTCGCTGAAAGAGCTCCATGGTGACATCGAGGCAGCATCTTCTTTGCTTCTTCTTTCAAAGAAGCCTATACGCATCATTGATTTGGTTTGTCAAAGAATGGGAAAATCCAATATTGTGAAAACTAGTTACTAG 537 0.3743 MGRKKIEMELVENRSARYVTFSKRKSGLFKKASELSILCNARVGIVGFTPSGNPFAFGSPNFQAVTEQYLHEGQELEGGSSRQIVTPSENPNINMMNKELSGLTEELKKVEEVNKGKAPIALADLNLKELLKVKASLKELHGDIEAASSLLLLSKKPIRIIDLVCQRMGKSNIVKTSY 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03635 178 Coils Coil 93 113 - -
Mepo2g03635 178 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Mepo2g03635 178 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Mepo2g03635 178 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 11 57 IPR002100 GO:0003677|GO:0046983
Mepo2g03635 178 PANTHER MADS BOX PROTEIN 3 144 - -
Mepo2g03635 178 FunFam Agamous-like MADS-box protein AGL62 13 78 - -
Mepo2g03635 178 SUPERFAMILY SRF-like 1 71 IPR036879 GO:0003677|GO:0046983
Mepo2g03635 178 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Mepo2g03635 178 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Mepo2g03635 178 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Mepo2g03635 178 Gene3D - 13 81 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03635 Mepo-Chr2 45699384 45699920 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03635 1 156 Type I MADS-box Gene Family AT2G34440 37.931 1.30e-34 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Mepo2g03635 SRF-TF 8.2e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03635 - - mtr:25493407 317.39