Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03628 ATGGCGAAAAAGGCTAAAGCCTCTCACTCTCACAAGAGCGCTTCTTCTTCTTCGGCCTCCACCTCCGGGAAACTATTGTTGGCGATTAAATCGAATGAGGGAATGAAGAGATCGTTGCGGCAGACTAAGTCAAGAGACATAACCAAAGCAGTGCAAAAAAAGAACAAGCAAAAGATTGATGCCAAGAAGCCGAAGAAACCCCCCACTGCTTTCTTCTACTTCTTGGAGGATTTTCGGAAAGAATTTAAAGATCAGAATCCAGATGTTAAGTCAATGCGTGATATTGGCAAGGCATGTGGAGAGAAGTGGAAAACAATGACTTTTGAGGAGAAAGTTCAATACTATGATATAGCAACAGAGAAGCGTGCAGAATTTGATAGAGCAACGACAGAGTATAACAAGAAAATGGAAAGTGGCGAATATGAAGAAACAGATGAGGAGTCAGAGTATGACGAGTAA 459 0.4183 MAKKAKASHSHKSASSSSASTSGKLLLAIKSNEGMKRSLRQTKSRDITKAVQKKNKQKIDAKKPKKPPTAFFYFLEDFRKEFKDQNPDVKSMRDIGKACGEKWKTMTFEEKVQYYDIATEKRAEFDRATTEYNKKMESGEYEETDEESEYDE 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03628 152 SUPERFAMILY HMG-box 53 135 IPR036910 -
Mepo2g03628 152 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 64 133 IPR009071 -
Mepo2g03628 152 MobiDBLite consensus disorder prediction 36 65 - -
Mepo2g03628 152 Pfam HMG (high mobility group) box 64 133 IPR009071 -
Mepo2g03628 152 MobiDBLite consensus disorder prediction 1 65 - -
Mepo2g03628 152 MobiDBLite consensus disorder prediction 11 27 - -
Mepo2g03628 152 SMART hmgende2 63 134 IPR009071 -
Mepo2g03628 152 MobiDBLite consensus disorder prediction 133 152 - -
Mepo2g03628 152 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 36 149 IPR031061 -
Mepo2g03628 152 Gene3D High mobility group box domain 47 149 IPR036910 -
Mepo2g03628 152 CDD HMG-box_AtHMGB1-like 65 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03628 Mepo-Chr2 45638735 45642086 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Mepo2g03628 HMG_box 2.3e-18 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03628 - - mtr:25493401 215.312