Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03624 ATGCCATCTCAAAACCTTAGTTTGACTCTAGTCATACTCATTTCAATTCTATCCATTATTGTTTCACATGTTGAACCATCAACCATTGAAGTTGAAATTGAAGCATTGAAAGCATTCAAAAAATCCATAACAAATGATCCAAACAAAGCTCTTGCAAATTGGATTAACACAATCCCTCATTGCAACTGGTCAGGCATTGCATGTAGCAATTCTTCAAAATATGTCATATCAATTTCACTTTTTGAACTTCAACTCCAAGGTGAGATTTCACCTTTCCTTGGAAACATTTCAACACTTCAACTTATTGATTTAACTTCAAATTCATTAACTGGTCAAATTCCACCTCAAATTAGTCTTTGCACTCAACTTACAACACTTTACCTTACTGCTAATTCTCTCTCAGGTTCAATCCCTCATGAGTTAGGTAACCTTAAAATGTTGCAGTATTTGGATATAGGTAATAACTATCTCAATGGAACCTTACCTGATAGCATATTTAACATAACTTCTTTGTTAGGTATTGCTTTCAATTTCAACAACCTTACTGGAACTATTCCATCAAATATAGGGAATTTAGTTAACACTATACAGATTGGAGGATTTGGTAATAGTTTTGTTGGATCTATACCTGTTTCTATAGGCCAATTAGGATCTTTGTTGTCTCTTGATTTTAGTCAAAATAAGTTATCAGGTGTCATACCTAGAGAGATTGGAAACCTAACAAATTTACAATATCTTTCATTGTTTCAAAATTCGTTGAGTGGAAAAATTCCTTCTGAGTTGGCTCATTGTAGCAATCTTGTTAACCTTGAGTTATATCAAAATAAGTTCATTGGAAGTATTCCTCATGAGCTGGGAAATTTAGTTCAATTGGAAACTTTGAGGTTGTTTGATAATAAATTGAACTCAACAATACCAGATTCTATATTTAGGTTGAAATCGTTAACACGATTAGGATTATCAGAGAATAACTTAGAGGGAACAATTTCTTCTGAGATTGGATCCTTGAGTTCCTTAAAAGTGTTAACTCTGCATTTGAATAAGTTTACCGGGACAATTCCTTCATCGATAACAAACTTGAAAAACTTGACATCTTTGTCCATGAGTCAGAATCTCCTTTCAGGTGAAATTCCTTCCAACTTAGGTGTGCTTCAAAATTTGAAGTTTCTTGTCTTGAACGACAACTTTTTACATGGACCTGTTCCTCCTAGCATTACCAATTGTACTAGTTTGGTTAATGTGAGTTTATCTATTAATTCTTTAACTGGAAAAATTCCTGAGGGTTTTTCAAGGTTGCCAAATCTTACTTTCCTGTCTTTTACATCCAACAAAATGAGTGGTGAAATACCAGATGATCTTTTCAATTGCTCAAACCTTAGTACTCTAGGTTTGGCAGATAACAACTTCAGTGGATCTATAAAATCCGGTATCAAAAATCTGTTTAATCTCATGCGTTTGAAGCTGAATAAAAATGCTTTCATAGGACCAATTCCACCAGAGATTGGTAACTTGAATAAACTCATCATTTTGTCTCTTTCTGAAAATAGATTATCAGGTCATATTCCAATAGAATTGTCCAAACTTTCTCTCCTTCAAGGACTCTCTCTTTATGACAATGCATTAGAAGGCACAATACCTGATAAACTTTCTGAACTAAAAGGATTGACTATACTTTTGCTGCATGAAAACAAGTTGGTTGGACAAATACCAGATTCTATCTCGAAGCTTGAGATGCTTTCATACTTAGATCTTCATGGAAACAAACTTAATGGCTCTATTCCGAAAAGCATGGGGAAGCTTGATCATCTGTTAATGTTGGATCTCTCTCACAACAAACTCACAGGACCAATTCCAGGAGACGTCGTTGCACACTTCAAAGACATGCAGATGTATCTTAACCTTTCTTACAACCACTTCGTTGGAAGTGTTCCATCTGAACTAGGGATGTTGGAAATGGTGCAAGCGATCGATGTTTCAAACAATAATCTTTCAGGTTCCCTTCCAATTACGCTTTCTGGGTGCAGAAATATGTTTAGTCTTGATTTCTCAGGAAACAATATTTCAGGTCCTATTCCTGCTGAAGTTTTTAGTGGCATGGACTTGCTTCAAAGCTTAAATCTTTCAAGAAATCATTTAGATGGTGAAATACCCGAAAGCTTGTCTCAGATTAAGAATCTTAGTTCCTTAGATCTTTCTCAGAATAACTTGAAGGGAACTATTCCTGAGGGATTTGCCAATCTTTCCAACCTGGTGCAGCTCAACTTTTCTTTCAATCAACTTGAAGGTCCTGTACCTTTGACTGGAATATTTTCACATATCAATGAATCTAGTATGATGGGAAACCAGGCTCTTTGTGGAGCAAAATTCCTAAGTCCATGCAGAGAGAACGATCATTCTCTATCCAAGAAGAGCATAGCTATCATTGCTGCTCTTGGATCTCTTGCTGTACTTCTACTTGTAGTGCTTCTGATTTTATATTTCAACCGAGGCACCATGTTCGGTAATTCTATAAAGAGTGTTGATACTGAGAATCATGAATCAGTGAACGGTTCAGCATTGGCTCTTAAAAGATTCAGTCCAAAGGAGTTAGAAAATGCAACCGGTTGTTTCAGCTCAGACTACATCATTGGGTCTAGTAGTTTGAGCACCGTTTACAAGGGTCAATTTGAAGATGGTCAGATTGTAGCCATAAAAAGGTTGAATTTGCACCAATTCTCAGCAAATACCGACAAGATATTCAAGAGAGAAGCCAGCACCTTGTGCCAGCTGAGACATAGGAATTTAGTTAAGATACACGGATATGCTTGGGAAAGTCAGAAAATAAAGGCTTTAGTTCTAGAGTACATGGAGAATGGGAATTTGGATAGCATCATACATGACAGAGAAGTTGATCAGTCGAGGTGGACATTATCTGAAAGACTCAGAGTTTTCATTTCTATTGCTAGTGGATTGGATTACTTGCACTCTGGTTATGATTTTCCCATTGTGCATTGTGATCTAAAGCCTTCTAACATCCTTTTAGACAGAGATTTTGAAGCTCATGTCAGTGATTTTGGGACAGCTCGAATACTTGGCATTCATCTGCAGGATGGTAGTGCCCTTTCCTCAACAGCAGCTTTGCAAGGCACAATTGGCTATTTGGCACCAGAGTTTGCCTACATGAGGAAAGTAACAACGAAAGTGGATGTGTTCAGCTTTGGCATCATAGTAATGGAATTTCTAACAAAAAGAAGGCCAACAGGGTTCTCAGAATCAACCAGTTTGCGTGATGTAGTGGCAAAAGCCGTTGCAAATGGAACAGAACAGCTTGTCAGCATTGTGGACCCTGAATTGATCACAAAAGACCATGGAGAAGTGTTGGAAGAGCTCTTTAAGCTTTCATTGTGCTGCACCCTCTCTGATCCTGAACGTCGTCCTAATATGAATGAAGTTTTATCTGCACTTGTGAAGCTTAACTCAGCAAGATAG 3468 0.3705 MPSQNLSLTLVILISILSIIVSHVEPSTIEVEIEALKAFKKSITNDPNKALANWINTIPHCNWSGIACSNSSKYVISISLFELQLQGEISPFLGNISTLQLIDLTSNSLTGQIPPQISLCTQLTTLYLTANSLSGSIPHELGNLKMLQYLDIGNNYLNGTLPDSIFNITSLLGIAFNFNNLTGTIPSNIGNLVNTIQIGGFGNSFVGSIPVSIGQLGSLLSLDFSQNKLSGVIPREIGNLTNLQYLSLFQNSLSGKIPSELAHCSNLVNLELYQNKFIGSIPHELGNLVQLETLRLFDNKLNSTIPDSIFRLKSLTRLGLSENNLEGTISSEIGSLSSLKVLTLHLNKFTGTIPSSITNLKNLTSLSMSQNLLSGEIPSNLGVLQNLKFLVLNDNFLHGPVPPSITNCTSLVNVSLSINSLTGKIPEGFSRLPNLTFLSFTSNKMSGEIPDDLFNCSNLSTLGLADNNFSGSIKSGIKNLFNLMRLKLNKNAFIGPIPPEIGNLNKLIILSLSENRLSGHIPIELSKLSLLQGLSLYDNALEGTIPDKLSELKGLTILLLHENKLVGQIPDSISKLEMLSYLDLHGNKLNGSIPKSMGKLDHLLMLDLSHNKLTGPIPGDVVAHFKDMQMYLNLSYNHFVGSVPSELGMLEMVQAIDVSNNNLSGSLPITLSGCRNMFSLDFSGNNISGPIPAEVFSGMDLLQSLNLSRNHLDGEIPESLSQIKNLSSLDLSQNNLKGTIPEGFANLSNLVQLNFSFNQLEGPVPLTGIFSHINESSMMGNQALCGAKFLSPCRENDHSLSKKSIAIIAALGSLAVLLLVVLLILYFNRGTMFGNSIKSVDTENHESVNGSALALKRFSPKELENATGCFSSDYIIGSSSLSTVYKGQFEDGQIVAIKRLNLHQFSANTDKIFKREASTLCQLRHRNLVKIHGYAWESQKIKALVLEYMENGNLDSIIHDREVDQSRWTLSERLRVFISIASGLDYLHSGYDFPIVHCDLKPSNILLDRDFEAHVSDFGTARILGIHLQDGSALSSTAALQGTIGYLAPEFAYMRKVTTKVDVFSFGIIVMEFLTKRRPTGFSESTSLRDVVAKAVANGTEQLVSIVDPELITKDHGEVLEELFKLSLCCTLSDPERRPNMNEVLSALVKLNSAR 1155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03624 1155 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 404 1149 - -
Mepo2g03624 1155 SUPERFAMILY L domain-like 525 788 - -
Mepo2g03624 1155 Pfam Leucine rich repeat 654 712 IPR001611 GO:0005515
Mepo2g03624 1155 SMART serkin_6 870 1149 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g03624 1155 Gene3D Ribonuclease Inhibitor 202 423 IPR032675 -
Mepo2g03624 1155 Gene3D Ribonuclease Inhibitor 630 801 IPR032675 -
Mepo2g03624 1155 FunFam LRR receptor-like serine/threonine-protein kinase FLS2 949 1155 - -
Mepo2g03624 1155 Pfam Protein kinase domain 873 1146 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g03624 1155 SMART LRR_typ_2 600 624 IPR003591 -
Mepo2g03624 1155 SMART LRR_typ_2 336 359 IPR003591 -
Mepo2g03624 1155 SMART LRR_typ_2 747 772 IPR003591 -
Mepo2g03624 1155 SMART LRR_typ_2 240 264 IPR003591 -
Mepo2g03624 1155 SMART LRR_typ_2 216 239 IPR003591 -
Mepo2g03624 1155 SMART LRR_typ_2 360 384 IPR003591 -
Mepo2g03624 1155 SMART LRR_typ_2 723 746 IPR003591 -
Mepo2g03624 1155 SMART LRR_typ_2 432 456 IPR003591 -
Mepo2g03624 1155 SMART LRR_typ_2 288 312 IPR003591 -
Mepo2g03624 1155 SMART LRR_typ_2 144 168 IPR003591 -
Mepo2g03624 1155 SMART LRR_typ_2 699 722 IPR003591 -
Mepo2g03624 1155 SMART LRR_typ_2 552 576 IPR003591 -
Mepo2g03624 1155 SMART LRR_typ_2 504 528 IPR003591 -
Mepo2g03624 1155 Gene3D Ribonuclease Inhibitor 523 629 IPR032675 -
Mepo2g03624 1155 Gene3D Ribonuclease Inhibitor 424 522 IPR032675 -
Mepo2g03624 1155 ProSitePatterns Serine/Threonine protein kinases active-site signature. 995 1007 IPR008271 GO:0004672|GO:0006468
Mepo2g03624 1155 FunFam LRR receptor-like serine/threonine-protein kinase 550 622 - -
Mepo2g03624 1155 FunFam LRR receptor-like serine/threonine-protein kinase FLS2 833 948 - -
Mepo2g03624 1155 SMART LRR_sd22_2 723 749 - -
Mepo2g03624 1155 SMART LRR_sd22_2 384 416 - -
Mepo2g03624 1155 SMART LRR_sd22_2 360 383 - -
Mepo2g03624 1155 SMART LRR_sd22_2 576 602 - -
Mepo2g03624 1155 SMART LRR_sd22_2 504 527 - -
Mepo2g03624 1155 SMART LRR_sd22_2 240 263 - -
Mepo2g03624 1155 SMART LRR_sd22_2 144 170 - -
Mepo2g03624 1155 Gene3D Transferase(Phosphotransferase) domain 1 949 1155 - -
Mepo2g03624 1155 Gene3D Ribonuclease Inhibitor 29 190 IPR032675 -
Mepo2g03624 1155 PRINTS Leucine-rich repeat signature 723 736 - -
Mepo2g03624 1155 PRINTS Leucine-rich repeat signature 603 616 - -
Mepo2g03624 1155 ProSiteProfiles Protein kinase domain profile. 870 1151 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g03624 1155 CDD STKc_IRAK 876 1151 - -
Mepo2g03624 1155 SUPERFAMILY L domain-like 29 305 - -
Mepo2g03624 1155 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 623 797 - -
Mepo2g03624 1155 FunFam LRR receptor-like serine/threonine-protein kinase FLS2 29 184 - -
Mepo2g03624 1155 Gene3D Phosphorylase Kinase; domain 1 832 948 - -
Mepo2g03624 1155 SUPERFAMILY RNI-like 221 619 - -
Mepo2g03624 1155 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 459 545 - -
Mepo2g03624 1155 FunFam Inactive leucine-rich repeat receptor-like protein kinase 218 458 - -
Mepo2g03624 1155 SUPERFAMILY Protein kinase-like (PK-like) 851 1148 IPR011009 -
Mepo2g03624 1155 Pfam Leucine rich repeat N-terminal domain 32 69 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03624 Mepo-Chr2 45613119 45616966 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03624 6 1151 Receptor kinase-like Gene Family AT5G46330 54.185 0.0 1146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mepo2g03624 Pkinase 4.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03624 K13420 - gmx:100817960 1669.06