Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03617 ATGTCTGATGAACCTAAACCTTATTACCAAGACTTCATGCTAGATCATAATTATCATCATCAGAAAACAGATCAAGAATCTAACAACATGTACTCATGTGAGAAACAATTTTCAACCTTTCATAACTTAGATTCATCACAACCTAATTACTTTGATCCATCATCTTATAATAATATGAGTTTCACAGAAAGTTTACAAGGAGGAAACATGGATCACTACAATTCACCACTTGCAACTTCTTTTGGAGTACTATCTCCTTCTTCATCAGAGGTTTTTTCATCTGTTGATCAAGGAAATCAAAAGCCTTCAGCTGGAGAATTAGTTGGTGGTGAACAAACCCTTGCTACACTTAACTCATCTATCTCTAATTCCTCATCTTCTGAAGCTGGAGGAGTAGAAGAAGAAGATTCAGGAAAGAGAAAGAAAAATATTGGACAGGTTAAAGAAGAACCGGGACAAGAAAGCTCTAAAAATGGGAACAACAAGGTTGATAAGAAGAAAGGAGAGAAGAAGCAGAAAGAACCAAGGTTTGCTTTCATGACAAAGAGTGAAGTTGATCAGCTAGAAGATGGATACAGATGGAGAAAATATGGACAGAAAGCTGTCAAGAATAGTCCATACCCTAGGAGCTATTACAGGTGTACAACACAGAAATGTACAGTGAAAAAACGCGTAGAAAGATCATATGAAGACCCAACAACTGTGATAACAACATATGAAGGTCAGCATAATCATCCTGTCCCCACTTCCCTAAGAGGCAATGCGGCTGCAATGTTCACACCTTCTAATTTGCGATCTACACCCACTCCTTTCTCGTATGGGTCAAACTTCCCCCAAGATCTTCTTCTCCACATGCACCACCACAACACCTTCAATATCACTCAACCAACAACACATACTACTAATAACGTTGCTGGTTCCATTTATTCACACAACAACATTAACAACTCACTTCTTCAACAATATCAACAACAACTTCCTCCTGATCAATATGGACTCCTTCAAGACATTGTCCCTTCCATGTTCCTCAACAGGACCAACCACAACTAA 1050 0.3848 MSDEPKPYYQDFMLDHNYHHQKTDQESNNMYSCEKQFSTFHNLDSSQPNYFDPSSYNNMSFTESLQGGNMDHYNSPLATSFGVLSPSSSEVFSSVDQGNQKPSAGELVGGEQTLATLNSSISNSSSSEAGGVEEEDSGKRKKNIGQVKEEPGQESSKNGNNKVDKKKGEKKQKEPRFAFMTKSEVDQLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCTVKKRVERSYEDPTTVITTYEGQHNHPVPTSLRGNAAAMFTPSNLRSTPTPFSYGSNFPQDLLLHMHHHNTFNITQPTTHTTNNVAGSIYSHNNINNSLLQQYQQQLPPDQYGLLQDIVPSMFLNRTNHN 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03617 349 MobiDBLite consensus disorder prediction 119 178 - -
Mepo2g03617 349 SMART WRKY_cls 188 247 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo2g03617 349 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 31 294 IPR044810 GO:0003700
Mepo2g03617 349 Gene3D WRKY domain 173 249 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo2g03617 349 MobiDBLite consensus disorder prediction 132 148 - -
Mepo2g03617 349 FunFam WRKY transcription factor 57 174 248 - -
Mepo2g03617 349 SUPERFAMILY WRKY DNA-binding domain 180 248 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo2g03617 349 ProSiteProfiles WRKY domain profile. 183 248 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo2g03617 349 MobiDBLite consensus disorder prediction 159 178 - -
Mepo2g03617 349 Pfam WRKY DNA -binding domain 189 246 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03617 Mepo-Chr2 45561533 45563598 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03617 38 343 WRKY Transcription Factor Family AT4G18170 48.208 8.08e-67 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mepo2g03617 WRKY 2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03617 - - cam:101497541 373.244