Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03616 ATGGAAAAGGAGCCACTGCTCCCATCATATTTCAGCCCCAGAAAGAAGCTTTCACCATTACCATCTCAACTTTTTCCTTTACCAGAAAACGATGAAATGGTTCTTCCTGTTACCCCTTCTGAGTTCAAGGATCGTCTCATCTTTGGTCCTTCACCAAGAGACCCTTCACCTTTGTCTGATGCCTTGACACTTTCACGTAATTCACCAAGTTCCTCTTCACATGATTTTGATTCATCACAACACTCTCAACAACAACAATTGACTTCTTGGTTAATTGATCCTAATTATCCATGGAGGAAAACAAATTTACATCGGTCGAAAACCGCGCCGGCGATGGCTGTTATAAGTGATTTTAATCATCATGCATCTGATAAAAGACCTCAATTTGGTAGTCAATCTATTGTTCATCAAGCTGTTATTCTTCTTGTTCTTTATTTGGCTTTAGGGGTTGTTATTTATTGGTTTAATCGGCATAATTTTACAGCAACTGAAACTCATCCTATAGTTGATGCATTGTATTTTTGTATAGTTACAATGTGTACAATAGGGTATGGTGATATTACACCTAATAGTACTGCAACCAAGATTTTCTCTATATTGTTTGTGTTGATTGGTTTTGGTTTTATTGATATACTGCTAAGTGGAATGGTTAGTTATGTTCTTGATTTGCAAGAGAATCATTTGTTGAGGACAGTGAAGGGAAGAGGGGAGAAGGATGGGAGGTCATATCTAGTTGATGTGAAGAAAGGGAGGATGAGGATTAGGATGAAGGTGGCATTGGCATTGGGGGTAGTGATACTTTGTATTGGACTTGGTGTCACGGTTATGCATTTTGTTGAAAGGCTTGGATGGGTAGATTCTTTTTATCTTTCGGTTATGTCTGTTACGACAGTTGGGTATGGTGATCATGCTTTCAAGACTTTGCATGGTCGTATCTTCGCTGCAATTTGGTTGCTCGTGTCTACGCTTGCGGTTGCCCGAGCATTCCTTTATTTGGCTGAGGCGAGAGTGGATAAGCGGCATAGGAGGATGGCTAAGTGGATTCTTGGTCAGGATATGACTGTTGCTGAGTTTCTTGCTGCTGACATAGACAATAATGGATTTGTGAGTAAATCAGAATATGTTATATACAAGCTCAAGGAGATGGGAAAAGTGACGGAGAAGGACATCATGCAGATCAGTGAGAAGTTTGATAGACTAGATACCGGAAACTGTGGAAAAATAACACTTGGTGATCTCATGGAGGGTCATAATTGA 1257 0.3994 MEKEPLLPSYFSPRKKLSPLPSQLFPLPENDEMVLPVTPSEFKDRLIFGPSPRDPSPLSDALTLSRNSPSSSSHDFDSSQHSQQQQLTSWLIDPNYPWRKTNLHRSKTAPAMAVISDFNHHASDKRPQFGSQSIVHQAVILLVLYLALGVVIYWFNRHNFTATETHPIVDALYFCIVTMCTIGYGDITPNSTATKIFSILFVLIGFGFIDILLSGMVSYVLDLQENHLLRTVKGRGEKDGRSYLVDVKKGRMRIRMKVALALGVVILCIGLGVTVMHFVERLGWVDSFYLSVMSVTTVGYGDHAFKTLHGRIFAAIWLLVSTLAVARAFLYLAEARVDKRHRRMAKWILGQDMTVAEFLAADIDNNGFVSKSEYVIYKLKEMGKVTEKDIMQISEKFDRLDTGNCGKITLGDLMEGHN 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03616 418 SUPERFAMILY EF-hand 354 414 IPR011992 -
Mepo2g03616 418 SUPERFAMILY Voltage-gated potassium channels 131 220 - -
Mepo2g03616 418 Pfam Ion channel 140 220 IPR013099 -
Mepo2g03616 418 Pfam Ion channel 265 333 IPR013099 -
Mepo2g03616 418 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 139 392 IPR003280 GO:0005267|GO:0016020|GO:0071805
Mepo2g03616 418 ProSitePatterns EF-hand calcium-binding domain. 362 374 IPR018247 -
Mepo2g03616 418 MobiDBLite consensus disorder prediction 58 79 - -
Mepo2g03616 418 Gene3D - 263 324 - -
Mepo2g03616 418 PRINTS Two pore domain K+ channel signature 177 205 IPR003280 GO:0005267|GO:0016020|GO:0071805
Mepo2g03616 418 PRINTS Two pore domain K+ channel signature 296 305 IPR003280 GO:0005267|GO:0016020|GO:0071805
Mepo2g03616 418 Gene3D - 325 418 - -
Mepo2g03616 418 SUPERFAMILY Voltage-gated potassium channels 248 355 - -
Mepo2g03616 418 MobiDBLite consensus disorder prediction 45 79 - -
Mepo2g03616 418 FunFam Two-pore potassium channel 5 123 233 - -
Mepo2g03616 418 MobiDBLite consensus disorder prediction 1 25 - -
Mepo2g03616 418 FunFam Two-pore potassium channel 3 241 355 - -
Mepo2g03616 418 Gene3D - 132 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03616 Mepo-Chr2 45540617 45545477 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03616 4 416 Ion Channels AT4G18160 62.558 0.0 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03616 K05389 - gmx:100804249 686.797
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g03616 2 45540617 45545477 Mepo2g03616 2 45540617 45545477 ECH